BioKin Home 
Bottom of page...
Citation Analysis
References to selected publications

Bibliographic citations to research articles published by Dr. Petr Kuzmic, proprietor of BioKin Ltd (last updated January 29, 2006).

Citation statistics

Research articles and book chapters published by Dr. Petr Kuzmic have been cited 836 times (1/29/2006) in other journal articles and books. In 2004 and 2005, the number of annual citations exceeded one hundred. The most highly cited paper (307 citations) has been the original article describing the program DYNAFIT - see section #17 below.

P.Kuzmic citations

P.Kuzmic citations

Complete list of citations


1Top of pageNext section
"Molecular characterization of Ancylostoma ceylanicum Kunitz-type serine protease inhibitor: Evidence for a role in hookworm-associated growth delay"
Chu, D; Bungiro, RD; Ibanez, M; Harrison, LM; Campodonico, E; Jones, BF; Mieszczanek, J; Kuzmic, P; Cappello, M (2004)
Infect. Immun. 72(4), 2214-2221.
Citations
  1. "Hookworm infection: new developments and prospects for control"
    Bungiro, R; Cappello, M (2004)
    Curr. Opin. Infect. Dis. 17(5), 421-426.

  2. "Ancylostoma ceylanicum anticoagulant peptide-1: role of the predicted reactive site amino acid in mediating inhibition of coagulation factors Xa and VIIa"
    Mieszczanek, J; Harrison, LM; Cappello, M (2004)
    Mol. Biochem. Parasitol. 137(1), 151-159.

  3. "Purification and molecular cloning of and immunization with Ancylostoma ceylanicum excretory-secretory protein 2, an immunoreactive protein produced by adult hookworms"
    Bungiro, RD; Solis, CV; Harrison, LA; Cappello, M (2004)
    Infect. Immun. 72(4), 2203-2213.

  4. "Characterization of a novel filarial serine protease inhibitor, Ov-SPI-1, from Onchocerca volvulus, with potential multifunctional roles during development of the parasite"
    Ford, L; Guiliano, DB; Oksov, Y; Debnath, AK; Liu, J; Williams, SA; Blaxter, ML; Lustigman, S (2005)
    J. Biol. Chem. 280(49), 40845-40856.

  5. "Detection of excretory/secretory coproantigens in experimental hookworm infection"
    Bungiro, RD; Cappello, M (2005)
    Am. J. Trop. Med. Hyg. 73(5), 915-920.

  6. "Host cytokine production, lymphoproliferation, and antibody responses during the course of Ancylostoma ceylanicum infection in the Golden Syrian hamster"
    Mendez, S; Valenzuela, JG; Wu, WH; Hotez, PJ (2005)
    Infect. Immun. 73(6), 3402-3407.


2Top of pageNext section
"Mechanism of loading the Escherichia coli DNA polymerase III sliding clamp - I. Two distinct activities for individual ATP sites in the gamma complex"
Williams, CR; Snyder, AK; Kuzmic, P; O'Donnell, M; Bloom, LB (2004)
J. Biol. Chem. 279(6), 4376-4385.
Citations
  1. "On the solution structure of the T4 sliding clamp (gp45)"
    Millar, D; Trakselis, MA; Benkovic, SJ (2004)
    Biochemistry 43(40), 12723-12727.

  2. "Dual functions, clamp opening and primer-template recognition, define a key clamp loader subunit"
    Coman, MM; Jin, M; Ceapa, R; Finkelstein, J; O'Donnell, M; Chait, BT; Hingorani, MM (2004)
    J. Mol. Biol. 342(5), 1457-1469.

  3. "'Screw-cap' clamp loader proteins that thread"
    Zhuang, Z; Spiering, MM; Berdis, AJ; Trakselis, MA; Benkovic, SJ (2004)
    Nat. Struct. Mol. Biol. 11(7), 580-581.

  4. "Mechanism of loading the Escherichia coli DNA polymerase III sliding clamp - II. Uncoupling the beta and DNA binding activities of the gamma complex"
    Snyder, AK; Williams, CR; Johnson, A; O'Donnell, M; Bloom, LB (2004)
    J. Biol. Chem. 279(6), 4386-4393.

  5. "The opened processivity clamp slides into view"
    Jeruzalmi, D (2005)
    Proc. Natl. Acad. Sci. U. S. A. 102(42), 14939-14940.

  6. "Cellular DNA replicases: Components and dynamics at the replication fork"
    Johnson, A; O'Donnell, M (2005)
    Annu. Rev. Biochem. 74, 283-315.

  7. "The bacteriophage P1 hot gene product can substitute for the Escherichia coli DNA polymerase III theta subunit"
    Chikova, AK; Schaaper, RM (2005)
    J. Bacteriol. 187(16), 5528-5536.

  8. "Structural analysis of the inactive state of the Escherichia coli DNA polymerase clamp-loader complex"
    Kazmirski, SL; Podobnik, M; Weitze, TF; O'Donnelll, M; Kuriyan, J (2004)
    Proc. Natl. Acad. Sci. U. S. A. 101(48), 16750-16755.


3Top of pageNext section
"Practical Robust Fit of Enzyme Inhibition Data"
Kuzmic, P; Hill, C; Janc, J (2004)
Methods Enzymol. 383, 366-381.
Citations
  1. "Structural basis for the highly selective inhibition of MMP-13"
    Engel, CK; Pirard, B; Schimanski, S; Kirsch, R; Habermann, J; Klingler, O; Schlotte, V; Weithmann, KU; Wendt, KU (2005)
    Chem. Biol. 12(2), 181-189.

  2. "A novel HIV-1 antiviral high throughput screening approach for the discovery of HIV-1 inhibitors"
    Blair, WS; Isaacson, J; Li, XQ; Cao, J; Peng, QH; Kong, GFZ; Patick, AK (2005)
    Antiviral Res. 65(2), 107-116.


4Top of pageNext section
"Effect of ribavirin and amantadine on early hepatitis C virus RNA rebound and clearance in serum during daily high-dose interferon"
Lake-Bakaar, G; Ruffini, L; Kuzmic, P (2003)
Dig. Dis. Sci. 48(1), 126-139.
Citations
  1. "Viral kinetics and hepatitis C"
    Lake-Bakaar, G; Frost, SDW (2003)
    Hepatology 38(6), 1588-1588.

  2. "Viral kinetics and hepatitis C - Reply"
    Perelson, AS; Ribeiro, RM; Layden-Almer, JE; Layden, TJ (2003)
    Hepatology 38(6), 1588-1589.

  3. "Evaluation of amantadine in chronic hepatitis C: a meta-analysis"
    Deltenre, P; Henrion, J; Canva, V; Dharancy, S; Texier, F; Louvet, A; De Maeght, S; Paris, JC; Mathurin, P (2004)
    J. Hepatol. 41(3), 462-473.

  4. "Hepatitis C-virus - Virus kinetics and resistance mechanisms"
    Herrmann, E; Sarrazin, C (2004)
    Z. Gastroent. 42(5), 387-396.

  5. "A randomized controlled trial of pegylated interferon alpha-2a (40 KD) or interferon alpha-2a plus ribavirin and amantadine vs interferon alpha-2a and ribavirin in treatment-naive patients with chronic hepatitis C"
    Mangia, A; Ricci, GL; Persico, M; Minerva, N; Carretta, V; Bacca, D; Cela, M; Piattelli, M; Annese, M; Maio, G; Conte, D; Guadagnino, V; Pazienza, V; Festi, D; Spirito, F; Andriulli, A (2005)
    J. Viral Hepatitis 12(3), 292-299.


5Top of pageNext section
"Kinetic determination of tight-binding impurities in enzyme inhibitors"
Kuzmic, P; Hill, C; Kirtley, MP; Janc, JW (2003)
Anal. Biochem. 319(2), 272-279.
Citations
  1. "Influence of DNA structure on DNA polymerase beta active site function - Extension of mutagenic DNA intermediates"
    Beard, WA; Shock, DD; Wilson, SH (2004)
    J. Biol. Chem. 279(30), 31921-31929.

  2. "Practical robust fit of enzyme inhibition data"
    Kuzmic, P; Hill, C; Janc, JW (2004)
    Methods Enzymol. 383, 366-381.


6Top of pageNext section
"A detailed physical map of the 6p reading disability locus, including new markers and confirmation of recombination suppression"
Ahn, J; Won, TW; Kaplan, DE; Londin, ER; Kuzmic, P; Gelernter, J; Gruen, JR (2002)
Hum. Genet. 111(4-5), 339-349.
Citations
  1. "A transcription map of the 6p22.3 reading disability locus identifying candidate genes"
    Londin, ER; Meng, HY; Gruen, JR (2003)
    BMC Genomics 4, .

  2. "Mutually exclusive recombination of wild-type and mutant loxP sites in vivo facilitates transposon-mediated deletions from both ends of genomic DNA in PACs"
    Chatterjee, PK; Shakes, LA; Srivastava, DK; Garland, DM; Harewood, KR; Moore, KJ; Coren, JS (2004)
    Nucleic Acids Res. 32(18), 5668-5676.


7Top of pageNext section
"Molecular characterization of Ancylostoma inhibitors of coagulation factor Xa - Hookworm anticoagulant activity in vitro predicts parasite bloodfeeding in vivo"
Harrison, LM; Nerlinger, A; Bungiro, RD; Cordova, JL; Kuzmic, P; Cappello, M (2002)
J. Biol. Chem. 277(8), 6223-6229.
Citations
  1. "A novel family of anticoagulants from the saliva of Ixodes scapularis"
    Narasimhan, S; Koski, RA; Beaulieu, B; Anderson, JF; Ramamoorthi, N; Kantor, F; Cappello, M; Fikrig, E (2002)
    Insect Mol. Biol. 11(6), 641-650.

  2. "Some aspects of parasitology and immunology in general medicine"
    Frydas, S; Madhappan, B; Kempuraj, D (2002)
    Int. J. Immunopathol. Pharmacol. 15(3), 165-170.

  3. "Inhibition mechanisms of hematophagous invertebrate compounds acting on the host blood coagulation and platelet aggregation pathways"
    Urata, J; Shojo, H; Kaneko, Y (2003)
    Biochimie 85(5), 493-500.

  4. "Ancylostoma ceylanicum anticoagulant peptide-1: role of the predicted reactive site amino acid in mediating inhibition of coagulation factors Xa and VIIa"
    Mieszczanek, J; Harrison, LM; Cappello, M (2004)
    Mol. Biochem. Parasitol. 137(1), 151-159.

  5. "Helminths at mucosal barriers - interaction with the immune system"
    Mulcahy, G; O'Neill, S; Donnelly, S; Dalton, JP (2004)
    Adv. Drug Deliv. Rev. 56(6), 853-868.

  6. "Molecular characterization of Ancylostoma ceylanicum Kunitz-type serine protease inhibitor: Evidence for a role in hookworm-associated growth delay"
    Chu, D; Bungiro, RD; Ibanez, M; Harrison, LM; Campodonico, E; Jones, BF; Mieszczanek, J; Kuzmic, P; Cappello, M (2004)
    Infect. Immun. 72(4), 2214-2221.

  7. "Disruption of Ixodes scapularis anticoagulation by using RNA interference"
    Narasimhan, S; Montgomery, RR; DePonte, K; Tschudi, C; Marcantonio, N; Anderson, JF; Sauer, JR; Cappello, M; Kantor, FS; Fikrig, E (2004)
    Proc. Natl. Acad. Sci. U. S. A. 101(5), 1141-1146.

  8. "Anticoagulant peptides from Ancylostoma caninum are immunologically distinct and localize to separate structures within the adult hookworm"
    Mieszczanek, J; Harrison, LM; Vlasuk, GP; Cappello, M (2004)
    Mol. Biochem. Parasitol. 133(2), 319-323.

  9. "Characterization of a novel filarial serine protease inhibitor, Ov-SPI-1, from Onchocerca volvulus, with potential multifunctional roles during development of the parasite"
    Ford, L; Guiliano, DB; Oksov, Y; Debnath, AK; Liu, J; Williams, SA; Blaxter, ML; Lustigman, S (2005)
    J. Biol. Chem. 280(49), 40845-40856.

  10. "Detection of excretory/secretory coproantigens in experimental hookworm infection"
    Bungiro, RD; Cappello, M (2005)
    Am. J. Trop. Med. Hyg. 73(5), 915-920.

  11. "Bioactive compounds in tick and mite venoms (saliva)"
    Tu, AT; Motoyashiki, T; Azimov, DA (2005)
    Toxin Rev. 24(2), 143-174.

  12. "Human hookworm infection in the 21st century"
    Brooker, S; Bethony, J; Hotez, PJ (2004)
    Adv.Parasitol. 58, 197-288.


8Top of pageNext section
"The effect of combining interferon, ribavirin and amantadine an hepatitis C viral dynamics: Further evidence that ribavirin and amantadine block de novo re-infection."
Lake-Bakaar, G; Ruffini, L; Kuzmic, P (2001)
Gastroenterology 120(5), A29-A29.
Citations


9Top of pageNext section
"A broad spectrum Kunitz type serine protease inhibitor secreted by the hookworm Ancylostoma ceylanicum"
Milstone, AM; Harrison, LM; Bungiro, RD; Kuzmic, P; Cappello, M (2000)
J. Biol. Chem. 275(38), 29391-29399.
Citations
  1. "Amino acid sequence of a trypsin inhibitor from a Spirometra (Spirometra erinaceieuropaei)"
    Sanda, A; Uchida, A; Itagaki, T; Kobayashi, H; Inokuchi, N; Koyama, T; Iwama, M; Ohgi, K; Irie, M (2001)
    Biol. Pharmacol. Bull. 24(12), 1356-1361.

  2. "Immune responses in hookworm infections"
    Loukas, A; Prociv, P (2001)
    Clin. Microbiol. Rev. 14(4), 689-703.

  3. "Ancylostoma caninum anticoagulant peptide-5: immunolocalization and in vitro neutralization of a major hookworm anti-thrombotic"
    Harrison, LM; Cordova, JL; Cappello, M (2001)
    Mol. Biochem. Parasitol. 115(1), 101-107.

  4. "Mitigation of hookworm disease by immunization with soluble extracts of Ancylostoma ceylanicum"
    Bungiro, RD; Greene, J; Kruglov, E; Cappello, M (2001)
    J. Infect. Dis. 183(9), 1380-1387.

  5. "Functional analysis of Toxoplasma gondii protease inhibitor 1"
    Morris, MT; Coppin, A; Tomavo, S; Carruthers, VB (2002)
    J. Biol. Chem. 277(47), 45259-45266.

  6. "Exploring the sialome of the tick Ixodes scapularis"
    Valenzuela, JG; Francischetti, IMB; Pham, VM; Garfield, MK; Mather, TN; Ribeiro, JMC (2002)
    J. Exp. Biol. 205(18), 2843-2864.

  7. "Molecular characterization of Ancylostoma inhibitors of coagulation factor Xa - Hookworm anticoagulant activity in vitro predicts parasite bloodfeeding in vivo"
    Harrison, LM; Nerlinger, A; Bungiro, RD; Cordova, JL; Kuzmic, P; Cappello, M (2002)
    J. Biol. Chem. 277(8), 6223-6229.

  8. "Ancylostoma ceylanicum excretory/secretory protein 1: purification and molecular cloning of a major secretory protein from adult hookworms"
    Bungiro, RD; Harrison, LM; Cappello, M (2002)
    Mol. Biochem. Parasitol. 119(1), 147-151.

  9. "Uncinaria stenocephala: antigenic characterization of larvae and adults worms using sera from naturally infected dogs"
    Postigo, I; Martinez, J; Cardona, G; Fernandez-Perez, I; Guisantes, JA (2003)
    Exp. Parasitol. 103(3-4), 171-173.

  10. "Isolation and molecular cloning of a secreted hookworm platelet inhibitor from adult Ancylostoma caninum"
    Del Valle, A; Jones, BF; Harrison, LM; Chadderdon, RC; Cappello, M (2003)
    Mol. Biochem. Parasitol. 129(2), 167-177.

  11. "Molecular cloning of a novel multidomain Kunitz-type proteinase inhibitor from the hookworm Ancylostoma caninum"
    Hawdon, JM; Datu, B; Crowell, M (2003)
    J. Parasitol. 89(2), 402-407.

  12. "Oral transfer of adult Ancylostoma ceylanicum hookworms into permissive and nonpermissive host species"
    Bungiro, RD; Anderson, BR; Cappello, M (2003)
    Infect. Immun. 71(4), 1880-1886.

  13. "Characterisation of humoral immune responses in dogs vaccinated with irradiated Ancylostoma caninum"
    Boag, PR; Parsons, JC; Presidente, PJA; Spithill, TW; Sexton, JL (2003)
    Vet. Immunol. Immunopathol. 92(1-2), 87-94.

  14. "Hookworm infection: new developments and prospects for control"
    Bungiro, R; Cappello, M (2004)
    Curr. Opin. Infect. Dis. 17(5), 421-426.

  15. "Ancylostoma ceylanicum anticoagulant peptide-1: role of the predicted reactive site amino acid in mediating inhibition of coagulation factors Xa and VIIa"
    Mieszczanek, J; Harrison, LM; Cappello, M (2004)
    Mol. Biochem. Parasitol. 137(1), 151-159.

  16. "A Kazal-like extracellular serine protease inhibitor from Phytophthora infestans targets the tomato pathogenesis-related protease P69B"
    Tian, MY; Huitema, E; da Cunha, L; Torto-Alalibo, T; Kamoun, S (2004)
    J. Biol. Chem. 279(25), 26370-26377.

  17. "Purification and molecular cloning of and immunization with Ancylostoma ceylanicum excretory-secretory protein 2, an immunoreactive protein produced by adult hookworms"
    Bungiro, RD; Solis, CV; Harrison, LA; Cappello, M (2004)
    Infect. Immun. 72(4), 2203-2213.

  18. "Molecular characterization of Ancylostoma ceylanicum Kunitz-type serine protease inhibitor: Evidence for a role in hookworm-associated growth delay"
    Chu, D; Bungiro, RD; Ibanez, M; Harrison, LM; Campodonico, E; Jones, BF; Mieszczanek, J; Kuzmic, P; Cappello, M (2004)
    Infect. Immun. 72(4), 2214-2221.

  19. "Detection of excretory/secretory coproantigens in experimental hookworm infection"
    Bungiro, RD; Cappello, M (2005)
    Am. J. Trop. Med. Hyg. 73(5), 915-920.

  20. "Have gastrointestinal nematodes outwitted the immune system?"
    Else, KJ (2005)
    Parasite Immunol. 27(10-11), 407-415.

  21. "Expressed sequence tags from the oomycete fish pathogen Saprolegnia parasitica reveal putative virulence factors"
    Torto-Alalibo, T; Tian, MY; Gajendran, K; Waugh, ME; van West, P; Kamoun, S (2005)
    BMC Microbiol. 5, .

  22. "Human hookworm infection in the 21st century"
    Brooker, S; Bethony, J; Hotez, PJ (2004)
    Adv.Parasitol. 58, 197-288.


10Top of pageNext section
"High-throughput screening of enzyme inhibitors: Automatic determination of light-binding inhibition constants"
Kuzmic, P; Sideris, S; Cregar, LM; Elrod, KC; Rice, KD; Janc, JW (2000)
Anal. Biochem. 281(1), 62-67.
Citations
  1. "A broad spectrum Kunitz type serine protease inhibitor secreted by the hookworm Ancylostoma ceylanicum"
    Milstone, AM; Harrison, LM; Bungiro, RD; Kuzmic, P; Cappello, M (2000)
    J. Biol. Chem. 275(38), 29391-29399.

  2. "Exploiting subsite S1 of trypsin-like serine proteases for selectivity: Potent and selective inhibitors of urokinase-type plasminogen activator"
    Mackman, RL; Katz, BA; Breitenbucher, JG; Hui, HC; Verner, E; Luong, C; Liu, L; Sprengeler, PA (2001)
    J. Med. Chem. 44(23), 3856-3871.

  3. "Development of serine protease inhibitors displaying a multicentered short (< 2.3 angstrom) hydrogen bond binding mode: Inhibitors of urokinase-type plasminogen activator and factor Xa"
    Verner, E; Katz, BA; Spencer, JR; Allen, D; Hataye, J; Hruzewicz, W; Hui, HC; Kolesnikov, A; Li, Y; Luong, C; Martelli, A; Radika, K; Rai, R; She, M; Shrader, W; Sprengeler, PA; Trapp, S; Wang, J; Young, WB; Mackman, RL (2001)
    J. Med. Chem. 44(17), 2753-2771.

  4. "Neutral inhibitors of the serine protease factor Xa"
    Shrader, WD; Young, WB; Sprengeler, PA; Sangalang, JC; Elrod, K; Carr, G (2001)
    Bioorg. Med. Chem. Lett. 11(14), 1801-1804.

  5. "Mechanistic implications of methylglyoxal synthase complexed with phosphoglycolohydroxamic acid as observed by X-ray crystallography and NMR spectroscopy"
    Marks, GT; Harris, TK; Massiah, MA; Mildvan, AS; Harrison, DHT (2001)
    Biochemistry 40(23), 6805-6818.

  6. "A novel serine protease inhibition motif involving a multi- centered short hydrogen bonding network at the active site"
    Katz, BA; Elrod, K; Luong, C; Rice, MJ; Mackman, RL; Sprengeler, PA; Spencer, J; Hataye, J; Janc, J; Link, J; Litvak, J; Rai, R; Rice, K; Sideris, S; Verner, E; Young, W (2001)
    J. Mol. Biol. 307(5), 1451-1486.

  7. "Highly potent non-peptidic inhibitors of the HCVNS3/NS4A serine protease"
    Sperandio, D; Gangloff, AR; Litvak, J; Goldsmith, R; Hataye, JM; Wang, VR; Shelton, EJ; Elrod, K; Janc, JW; Clark, JM; Rice, K; Weinheimer, S; Yeung, KS; Meanwell, NA; Hernandez, D; Staab, AJ; Venables, BL; Spencer, JR (2002)
    Bioorg. Med. Chem. Lett. 12(21), 3129-3133.

  8. "Novel route to the synthesis of peptides containing 2-amino-1 '-hydroxymethyl ketones and their application as cathepsin K inhibitors"
    Mendonca, RV; Venkatraman, S; Palmer, JT (2002)
    Bioorg. Med. Chem. Lett. 12(20), 2887-2891.

  9. "Contribution of multicentered short hydrogen bond arrays to potency of active site-directed serine protease inhibitors"
    Katz, BA; Spencer, JR; Elrod, K; Luong, C; Mackman, RL; Rice, M; Sprengeler, PA; Allen, D; Janc, J (2002)
    J. Am. Chem. Soc. 124(39), 11657-11668.

  10. "Peptidic 1-cyanopyrrolidines: Synthesis and SAR of a series of potent, selective cathepsin inhibitors"
    Rydzewski, RM; Bryant, C; Oballa, R; Wesolowski, G; Rodan, SB; Bass, KE; Wong, DH (2002)
    Bioorg. Med. Chem. 10(10), 3277-3284.

  11. "Engineering inhibitors highly selective for the S1 sites of Ser190 trypsin-like serine protease drug targets"
    Katz, BA; Sprengeler, PA; Luong, C; Verner, E; Elrod, K; Kirtley, M; Janc, J; Spencer, JR; Breitenbucher, JG; Hui, H; McGee, D; Allen, D; Martelli, A; Mackman, RL (2001)
    Chem. Biol. 8(11), 1107-1121.

  12. "Potent bivalent inhibition of human tryptase-beta by a synthetic inhibitor"
    Selwood, T; Elrod, KC; Schechter, NM (2003)
    Biol. Chem. 384(12), 1605-1611.

  13. "Novel class of bivalent glutathione S-transferase inhibitors"
    Lyon, RP; Hill, JJ; Atkins, WM (2003)
    Biochemistry 42(35), 10418-10428.

  14. "Kinetic determination of tight-binding impurities in enzyme inhibitors"
    Kuzmic, P; Hill, C; Kirtley, MP; Janc, JW (2003)
    Anal. Biochem. 319(2), 272-279.

  15. "Elaborate manifold of short hydrogen bond arrays mediating binding of active site-directed serine protease inhibitors"
    Katz, BA; Elrod, K; Verner, E; Mackman, RL; Luong, C; Shrader, WD; Sendzik, M; Spencer, JR; Sprengeler, PA; Kolesnikov, A; Tai, VWF; Hui, HC; Breitenbucher, G; Allen, D; Janc, JW (2003)
    J. Mol. Biol. 329(1), 93-120.

  16. "Dissecting and designing inhibitor selectivity determinants at the S1 site using an artificial Ala190 protease (Ala190 uPA)"
    Katz, BA; Luong, C; Ho, JD; Somoza, JR; Gjerstad, E; Tang, J; Williams, SR; Verner, E; Mackman, RL; Young, WB; Sprengeler, PA; Chan, H; Mortara, K; Janc, JW; McGrath, ME (2004)
    J. Mol. Biol. 344(2), 527-547.

  17. "Biochemical characterization of prostasin, a channel activating protease"
    Shipway, A; Danahay, H; Williams, JA; Tully, DC; Backes, BJ; Harris, JL (2004)
    Biochem. Biophys. Res. Commun. 324(2), 953-963.

  18. "Enzyme microarrays: On-chip determination of inhibition constants based on affinity-label defection of enzymatic activity"
    Eppinger, J; Funeriu, DP; Miyake, M; Denizot, L; Miyake, J (2004)
    Angew. Chem.-Int. Edit. 43(29), 3806-3810.

  19. "Practical robust fit of enzyme inhibition data"
    Kuzmic, P; Hill, C; Janc, JW (2004)
    Methods Enzymol. 383, 366-381.

  20. "Determination of accurate K-I values for tight-binding enzyme inhibitors: an in silico study of experimental error and assay design"
    Murphy, DJ (2004)
    Anal. Biochem. 327(1), 61-67.

  21. "A new member of the bacterial ribonuclease inhibitor family from Saccharopolyspora erythraea"
    Krajcikova, D; Hartley, RW (2004)
    FEBS Lett. 557(1-3), 164-168.

  22. "Peptide ketobenzoxazole inhibitors bound to cathepsin K"
    McGrath, ME; Sprengeler, PA; Hill, CM; Martichonok, V; Cheung, H; Somoza, JR; Palmer, JT; Janc, JW (2003)
    Biochemistry 42(51), 15018-15028.

  23. "Design and synthesis of tri-ring P-3 benzamide-containing aminonitriles as potent, selective, orally effective inhibitors of cathepsin K"
    Palmer, JT; Bryant, C; Wang, DX; Davis, DE; Setti, EL; Rydzewski, RM; Venkatraman, S; Tian, ZQ; Burrill, LC; Mendonca, RV; Springman, E; McCarter, J; Chung, T; Cheung, H; Janc, JW; McGrath, M; Somoza, JR; Enriquez, P; Yu, ZW; Strickley, RM; Liu, L; Venuti, MC; Percival, MD; Falgueyret, JP; Prasit, P; Oballa, R; Riendeau, D; Young, RN; Wesolowski, G; Rodan, SB; Johnson, C; Kimmel, DB; Rodan, G (2005)
    J. Med. Chem. 48(24), 7520-7534.

  24. "Expression, crystallization, and three-dimensional structure of the catalytic domain of human plasma kallikrein"
    Tang, J; Yu, CL; Williams, SR; Springman, E; Jeffery, D; Sprengeler, PA; Estevez, A; Sampang, J; Shrader, W; Spencer, J; Young, W; McGrath, M; Katz, BA (2005)
    J. Biol. Chem. 280(49), 41077-41089.

  25. "Functional profiling of recombinant NS3 proteases from all four serotypes of dengue virus using tetrapeptide and octapeptide substrate libraries"
    Li, J; Lim, SP; Beer, D; Patel, V; Wen, DY; Tumanut, C; Tully, DC; Williams, JA; Jiricek, J; Priestle, JP; Harris, JL; Vasudevan, SG (2005)
    J. Biol. Chem. 280(31), 28766-28774.

  26. "Enzyme family-specific and activity-based screening of chemical libraries using enzyme microarrays"
    Funeriu, DP; Eppinger, J; Denizot, L; Miyake, M; Miyake, J (2005)
    Nat. Biotechnol. 23(5), 622-627.

  27. "3,4-disubstituted azetidinones as selective inhibitors of the cysteine protease cathepsin K. Exploring P3 elements for potency and selectivity"
    Setti, EL; Davis, D; Janc, JW; Jeffery, DA; Cheung, H; Yu, W (2005)
    Bioorg. Med. Chem. Lett. 15(5), 1529-1534.


11Top of pageNext section
"HCV viral dynamics during therapy with high dose interferon-A-2B plus or minus ribavirin: Correlation with ALT suggests ribavirin may suppress early de novo re-infection."
Lake-Bakaar, GV; Ruffini, L; Kuzmic, P (2000)
Gastroenterology 118(Pt. Part 1 Suppl. 2), A1016-A1016.
Citations


12Top of pageNext section
"High-throughput screening of enzyme inhibitors: Simultaneous determination of tight-binding inhibition constants and enzyme concentration"
Kuzmic, P; Elrod, KC; Cregar, LM; Sideris, S; Rai, R; Janc, JW (2000)
Anal. Biochem. 286(1), 45-50.
Citations
  1. "Kinetic determination of tight-binding impurities in enzyme inhibitors"
    Kuzmic, P; Hill, C; Kirtley, MP; Janc, JW (2003)
    Anal. Biochem. 319(2), 272-279.

  2. "Expression and characterization of recombinant fungal acetyl-CoA carboxylase and isolation of a soraphen-binding domain"
    Weatherly, SC; Volrath, SL; Elich, TD (2004)
    Biochem. J. 380(Pt. Part 1), 105-110.

  3. "Practical robust fit of enzyme inhibition data"
    Kuzmic, P; Hill, C; Janc, JW (2004)
    Methods Enzymol. 383, 366-381.

  4. "Determination of accurate K-I values for tight-binding enzyme inhibitors: an in silico study of experimental error and assay design"
    Murphy, DJ (2004)
    Anal. Biochem. 327(1), 61-67.

  5. "Catalytic activity of human ADAM33"
    Zou, J; Zhu, F; Liu, JJ; Wang, WY; Zhang, RM; Garlisi, CG; Liu, YH; Wang, SH; Shah, H; Wan, YT; Umland, SP (2004)
    J. Biol. Chem. 279(11), 9818-9830.

  6. "Structural analysis of caspase-1 inhibitors derived from tethering"
    O'Brien, T; Fahr, BT; Sopko, MM; Lam, JW; Waal, ND; Raimundo, BC; Purkey, HE; Pham, P; Romanowski, MJ (2005)
    Acta Crystallogr. F-Struct. Biol. Cryst. Commun. 61(Pt. Part 5), 451-458.

  7. "ADAM33 enzyme properties and substrate specificity"
    Zou, J; Zhang, RM; Zhu, F; Liu, JJ; Madison, V; Umland, SP (2005)
    Biochemistry 44(11), 4247-4256.

  8. "Purification of cynarases from artichoke (Cynara scolymus L.): enzymatic properties of cynarase A"
    Sidrach, L; Garcia-Canovas, F; Tudela, J; Rodriguez-Lopez, JN (2005)
    Phytochemistry 66(1), 41-49.


13Top of pageNext section
"General numerical treatment of competitive binding kinetics: Application to thrombin-dehydrothrombin-hirudin"
Kuzmic, P (1999)
Anal. Biochem. 267(1), 17-23.
Citations
  1. "Accurate determination of rate constants of very slow, tight- binding competitive inhibitors by numerical solution of differential equations, independently of precise knowledge of the enzyme concentration"
    Plesner, IW; Bulow, A; Bols, M (2001)
    Anal. Biochem. 295(2), 186-193.

  2. "Simulation of crosslink and graft mechanism of hydrogenated-NBR/zinc Di-methacrylate composites by Moving Die Rheometer"
    Sato, T; Fujino, A; Hayashi, S; Oyama, M; Ono, K (2002)
    Rubber Chem. Technol. 75(5), 943-954.

  3. "SOLVERSTAT: a new utility for multipurpose analysis. An application to the investigation of dioxygenated Co(II) complex formation in dimethylsulfoxide solution"
    Comuzzi, C; Polese, P; Melchior, A; Portanova, R; Tolazzi, M (2003)
    Talanta 59(1), 67-80.

  4. "tmRNA from Thermus thermophilus - Interaction with alanyl-tRNA synthetase and elongation factor Tu"
    Stepanov, VG; Nyborg, J (2003)
    Eur. J. Biochem. 270(3), 463-475.

  5. "Studies on the different modes of action of the anticoagulant protease inhibitors DX-9065a and argatroban - I. Effects on thrombin generation"
    Nagashima, H (2002)
    J. Biol. Chem. 277(52), 50439-50444.

  6. "Bcl-2 regulator FKBP38 is activated by Ca2+/calmodulin"
    Edlich, F; Weiwad, M; Erdmann, F; Fanghanel, J; Jarczowski, F; Rahfeld, JU; Fischer, G (2005)
    Embo J. 24(14), 2688-2699.

  7. "Displacement enzyme linked aptamer assay"
    Baldrich, E; Acero, JL; Reekmans, G; Laureyn, W; O'Sullivan, CK (2005)
    Anal. Chem. 77(15), 4774-4784.

  8. "A simple and rapid method to measure cholesterol binding to P450s and other proteins"
    Mast, N; Pikuleva, IA (2005)
    J. Lipid Res. 46(7), 1561-1568.

  9. "A general framework for development and data analysis of competitive high-throughput screens for small-molecule inhibitors of protein - Protein interactions by fluorescence polarization"
    Roehrl, MHA; Wang, JY; Wagner, G (2004)
    Biochemistry 43(51), 16056-16066.

  10. "Aptasensor development: Elucidation of critical parameters for optimal aptamer performance"
    Baldrich, E; Restrepo, A; O'Sullivan, CK (2004)
    Anal. Chem. 76(23), 7053-7063.


14Top of pageNext section
"Fixed-point methods for computing the equilibrium composition of complex biochemical mixtures"
Kuzmic, P (1998)
Biochem. J. 331(Pt. Part 2), 571-575.
Citations
  1. "General numerical treatment of competitive binding kinetics: Application to thrombin-dehydrothrombin-hirudin"
    Kuzmic, P (1999)
    Anal. Biochem. 267(1), 17-23.


15Top of pageNext section
"Inhibition of human steroid 5 alpha reductases type I and II by 6-aza-steroids: Structural determinants of one-step vs two-step mechanism"
Moss, ML; Kuzmic, P; Stuart, JD; Tian, GC; Peranteau, AG; Frye, SV; Kadwell, SH; Kost, TA; Overton, LK; Patel, IR (1996)
Biochemistry 35(11), 3457-3464.
Citations
  1. "Effect of finasteride (PROSCAR(R)) on the proliferation of cultured epithelial and stromal cells from normal and hyperplastic human prostates"
    Lobaccaro, JM; Boudon, C; Lechevallier, E; Mottet, N; Rebillard, X; Lumbroso, S; Gibelin, B; Sultan, C (1996)
    Cell. Mol. Biol. 42(4), 511-518.

  2. "Program DYNAFIT for the analysis of enzyme kinetic data: Application to HIV proteinase"
    Kuzmic, P (1996)
    Anal. Biochem. 237(2), 260-273.

  3. "Pharmacological options in the treatment of benign prostatic hyperplasia"
    Kenny, B; Ballard, S; Blagg, J; Fox, D (1997)
    J. Med. Chem. 40(9), 1293-1315.

  4. "Inhibitors of enzymes of androgen biosynthesis: cytochrome P450(17 alpha) and 5 alpha-steroid reductase"
    Jarman, M; Smith, HJ; Nicholls, PJ; Simons, C (1998)
    Nat. Prod. Rep. 15(5), 495-512.

  5. "The biosynthesis of steroids and triterpenoids"
    Brown, GD (1998)
    Nat. Prod. Rep. 15(6), 653-696.

  6. "Dihydrotestosterone and the concept of 5 alpha-reductase inhibition in human benign prostatic hyperplasia"
    Bartsch, G; Rittmaster, RS; Klocker, H (2000)
    Eur. Urol. 37(4), 367-380.

  7. "Effectors of HIV-1 protease peptidolytic activity"
    Porter, DJT; Hanlon, MH; Carter, LH; Danger, DP; Furfine, ES (2001)
    Biochemistry 40(37), 11131-11139.

  8. "Finasteride: A long-term follow-up in the treatment of recurrent hematuria associated with benign prostatic hyperplasia"
    Delakas, D; Lianos, E; Karyotis, I; Cranidis, A (2001)
    Urol.Int. 67(1), 69-72.

  9. "Linear relationships between the ligand binding energy and the activation energy of time-dependent inhibition of steroid 5 alpha-reductase by Delta(l)-4-azasteroids"
    Tian, GC; Haffner, CD (2001)
    J. Biol. Chem. 276(24), 21359-21364.

  10. "Inhibitors of steroidogenesis as agents for the treatment of hormone-dependent cancers"
    Smith, HJ; Nicholls, PJ; Simons, C; Le Lain, R (2001)
    Expert Opin. Ther. Patents 11(5), 789-824.

  11. "Dihydrotestosterone and the role of 5-alpha-reductase inhibitors in benign prostate hyperplasia"
    Bartsch, G; Rittmaster, RS; Klocker, H (2002)
    Urologe A 41(5), 412-+.

  12. "Dihydrotestosterone and the concept of 5 alpha-reductase inhibition in human benign prostatic hyperplasia"
    Bartsch, G; Rittmaster, RS; Klocker, H (2002)
    World J. Urol. 19(6), 413-425.

  13. "Design and synthesis of 1,2,4-oxadiazole derivatives as non- steroidal 5 alpha-reductase inhibitors"
    Chang, CS; Kan, WM; Chen, CL; Wang, KC; Chern, JW (2002)
    J. Chin. Chem. Soc. 49(1), 83-89.

  14. "The influence of homo-aza-steroids on the crystallization of hydroxyapatite in vitro"
    Koutsopoulos, S; Maniatis, C; Xenos, CD; Dalas, E (2001)
    Cryst. Growth Des. 1(5), 367-372.

  15. "Neuroactive steroid 3 alpha-hydroxy-5 alpha-pregnan-20-one modulates ethanol-induced loss of righting reflex in rats"
    Khisti, RT; VanDoren, MJ; O'Buckley, T; Morrow, AL (2003)
    Brain Res. 980(2), 255-265.

  16. "Effect of some cardiac and respiratory drugs on succinate-cytochrome c reductase"
    Balbaa, M; Al-Meer, J; Al-Khal, A (2004)
    J. Enzym. Inhib. Med. Chem. 19(4), 343-347.

  17. "QSAR of human steroid 5 alpha-reductase inhibitors: Where are the differences between isoenzyme type 1 and 2?"
    Hutter, MC; Hartmann, RW (2004)
    QSAR Comb. Sci. 23(6), 406-415.

  18. "Pharmacogenetic analysis of human steroid 5 alpha reductase type II: comparison of finasteride and dutasteride"
    Makridakis, N; Reichardt, JKV (2005)
    J. Mol. Endocrinol. 34(3), 617-623.

  19. "Neurosteroid analogues: synthesis of 6-aza-allopregnanolone"
    Kasal, A; Matyas, L; Budesinsky, M (2005)
    Tetrahedron 61(9), 2269-2278.

  20. "Effects of 5 alpha reductase inhibitors on androgen-dependent human prostatic carcinoma cells"
    Festuccia, C; Angelucci, A; Gravina, G; Muzi, P; Vicentini, C; Bologna, M (2005)
    J. Cancer Res. Clin. Oncol. 131(4), 243-254.


16Top of pageNext section
"Mechanical effects on the kinetics of the HIV proteinase deactivation"
Kuzmic, P; Peranteau, AG; GarciaEcheverria, C; Rich, DH (1996)
Biochem. Biophys. Res. Commun. 221(2), 313-317.
Citations
  1. "Effectors of HIV-1 protease peptidolytic activity"
    Porter, DJT; Hanlon, MH; Carter, LH; Danger, DP; Furfine, ES (2001)
    Biochemistry 40(37), 11131-11139.

  2. "HIV-1 protease: Characterization of a catalytically competent enzyme-substrate intermediate"
    Porter, DJT; Hanlon, MH; Furfine, ES (2002)
    Biochemistry 41(4), 1302-1307.


17Top of pageNext section
"Program DYNAFIT for the analysis of enzyme kinetic data: Application to HIV proteinase"
Kuzmic, P (1996)
Anal. Biochem. 237(2), 260-273.
Citations
  1. "E2P phosphoforms of Na,K-ATPase. II. Interaction of substrate and cation-binding sites in P-i phosphorylation of Na,K-ATPase"
    Cornelius, F; Fedosova, NU; Klodos, I (1998)
    Biochemistry 37(47), 16686-16696.

  2. "Stability of recombinant yeast protoporphyrinogen oxidase: Effects of diphenyl ether-type herbicides and diphenyleneiodonium"
    Arnould, S; Takahashi, M; Camadro, JM (1998)
    Biochemistry 37(37), 12818-12828.

  3. "Spectroscopic characterization of intermediates in the urate oxidase reaction"
    Kahn, K; Tipton, PA (1998)
    Biochemistry 37(33), 11651-11659.

  4. "Antibody catalysis of peptidyl-prolyl cis-trans isomerization in the folding of RNase T1"
    Ma, LF; Hsieh-Wilson, LC; Schultz, PG (1998)
    Proc. Natl. Acad. Sci. U. S. A. 95(13), 7251-7256.

  5. "Kinetic determinations and some kinetic aspects of analytical chemistry"
    Crouch, SR; Cullen, TF; Scheeline, A; Kirkor, ES (1998)
    Anal. Chem. 70(12), 53R-106R.

  6. "Fixed-point methods for computing the equilibrium composition of complex biochemical mixtures"
    Kuzmic, P (1998)
    Biochem. J. 331(Pt. 2), 571-575.

  7. "Regulation of extrinsic pathway factor Xa formation by tissue factor pathway inhibitor"
    Baugh, RJ; Broze, GJ; Krishnaswamy, S (1998)
    J. Biol. Chem. 273(8), 4378-4386.

  8. "Design of potent selective zinc-mediated serine protease inhibitors"
    Katz, BA; Clark, JM; Finer-Moore, JS; Jenkins, TE; Johnson, CR; Ross, MJ; Luong, C; Moore, WR; Stroud, RM (1998)
    Nature 391(6667), 608-612.

  9. "Structure-based thermodynamic design of peptide ligands: Application to peptide inhibitors of the aspartic protease endothiapepsin"
    Luque, I; Gomez, J; Semo, N; Freire, E (1998)
    Proteins 30(1), 74-85.

  10. "Crowding effects on EcoRV kinetics and binding"
    Wenner, JR; Bloomfield, VA (1999)
    Biophys. J. 77(6), 3234-3241.

  11. "Selective antibody-catalyzed solvolysis of endo-2-norbornyl mesylate"
    Ma, LF; Sweet, EH; Schultz, PG (1999)
    J. Am. Chem. Soc. 121(43), 10227-10228.

  12. "Substrate channeling"
    Spivey, HO; Ovadi, J (1999)
    Methods 19(2), 306-321.

  13. "Testing of kinetic models: usefulness of the multiresponse approach as applied to chlorophyll degradation in foods"
    van Boekel, MAJS (1999)
    Food Res. Int. 32(4), 261-269.

  14. "Role of electrophilic and general base catalysis in the mechanism of Escherichia coli uracil DNA glycosylase"
    Drohat, AC; Jagadeesh, J; Ferguson, E; Stivers, JT (1999)
    Biochemistry 38(37), 11866-11875.

  15. "Rate determination in phosphorylation of shark rectal Na,K- ATPase by ATP: Temperature sensitivity and effects of ADP"
    Cornelius, F (1999)
    Biophys. J. 77(2), 934-942.

  16. "Adenylosuccinate synthase from Saccharomyces cerevisiae: homologous overexpression, purification and characterization of the recombinant protein"
    Lipps, G; Krauss, G (1999)
    Biochem. J. 341(Pt. 3), 537-543.

  17. "Synthesis and biochemical evaluation of bis(6,7-dimethyl-8-D- ribityllumazines) as potential bisubstrate analogue inhibitors of riboflavin synthase"
    Cushman, M; Mavandadi, F; Yang, DL; Kugelbrey, K; Kis, K; Bacher, A (1999)
    J. Org. Chem. 64(13), 4635-4642.

  18. "The propeptides of the vitamin K-dependent proteins possess different affinities for the vitamin K-dependent carboxylase"
    Stanley, TB; Jin, DY; Lin, PJ; Stafford, DW (1999)
    J. Biol. Chem. 274(24), 16940-16944.

  19. "Design, synthesis, and biological evaluation of homologous phosphonic acids and sulfonic acids as inhibitors of lumazine synthase"
    Cushman, M; Mihalic, JT; Kis, K; Bacher, A (1999)
    J. Org. Chem. 64(11), 3838-3845.

  20. "Reactions of prostaglandin endoperoxide synthase with hydroperoxide and reducing substrates under single turnover conditions"
    Koshkin, V; Dunford, HB (1999)
    Biochim. Biophys. Acta-Protein Struct. Molec. Enzym. 1431(1), 47-52.

  21. "RXP 407, a phosphinic peptide, is a potent inhibitor of angiotensin I converting enzyme able to differentiate between its two active sites"
    Dive, V; Cotton, J; Yiotakis, A; Michaud, A; Vassiliou, S; Jiracek, J; Vazeux, G; Chauvet, MT; Cuniasse, P; Corvol, P (1999)
    Proc. Natl. Acad. Sci. U. S. A. 96(8), 4330-4335.

  22. "Coupling of the peroxidase and cyclooxygenase reactions of prostaglandin H synthase"
    Koshkin, V; Dunford, HB (1999)
    Biochim. Biophys. Acta-Protein Struct. Molec. Enzym. 1430(2), 341-348.

  23. "Buffer effects on EcoRV kinetics as measured by fluorescent staining and digital imaging of plasmid cleavage"
    Wenner, JR; Bloomfield, VA (1999)
    Anal. Biochem. 268(2), 201-212.

  24. "Superoxide free radical generation by Amadori compounds: The role of acyclic forms and metal ions"
    Mossine, VV; Linetsky, M; Glinsky, GV; Ortwerth, BJ; Feather, MS (1999)
    Chem. Res. Toxicol. 12(3), 230-236.

  25. "Crystal structure of Escherichia coli uracil DNA glycosylase and its complexes with uracil and glycerol: Structure and glycosylase mechanism revisited"
    Xiao, GY; Tordova, M; Jagadeesh, J; Drohat, AC; Stivers, JT; Gilliland, GL (1999)
    Proteins 35(1), 13-24.

  26. "Kinetic mechanism of damage site recognition and uracil flipping by Escherichia coli uracil DNA glycosylase"
    Stivers, JT; Pankiewicz, KW; Watanabe, KA (1999)
    Biochemistry 38(3), 952-963.

  27. "Studies on the catalysis of carbon-cobalt bond homolysis by ribonucleoside triphosphate reductase: Evidence for concerted carbon-cobalt bond homolysis and thiyl radical formation"
    Licht, SS; Booker, S; Stubbe, JA (1999)
    Biochemistry 38(4), 1221-1233.

  28. "Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimation"
    Mendes, P; Kell, DB (1998)
    Bioinformatics 14(10), 869-883.

  29. "Functional roles of the conserved threonine 250 in the target recognition domain of HhaI DNA methyltransferase"
    Vilkaitis, G; Dong, AP; Weinhold, E; Cheng, XD; Klimasauskas, S (2000)
    J. Biol. Chem. 275(49), 38722-38730.

  30. "Characterization of enzymatic processes by rapid mix-quench mass spectrometry: The case of dTDP-glucose 4,6-dehydratase"
    Gross, JW; Hegeman, AD; Vestling, MM; Frey, PA (2000)
    Biochemistry 39(45), 13633-13640.

  31. "X-ray structures of five renin inhibitors bound to saccharopepsin: Exploration of active-site specificity"
    Cronin, NB; Badasso, MO; Tickle, IJ; Dreyer, T; Hoover, DJ; Rosati, RL; Humblet, CC; Lunney, EA; Cooper, JB (2000)
    J. Mol. Biol. 303(5), 745-760.

  32. "The zinc metalloregulatory protein Synechococcus PCC7942 SmtB binds a single zinc ion per monomer with high affinity in a tetrahedral coordination geometry"
    VanZile, ML; Cosper, NJ; Scott, RA; Giedroc, DP (2000)
    Biochemistry 39(38), 11818-11829.

  33. "Mechanism of elementary catalytic steps of pyruvate oxidase from Lactobacillus plantarum"
    Tittmann, K; Golbik, R; Ghisla, S; Hubner, G (2000)
    Biochemistry 39(35), 10747-10754.

  34. "Dynamic hemicarcerands and hemicarceplexes"
    Ro, S; Rowan, SJ; Pease, AR; Cram, DJ; Stoddart, JF (2000)
    Org. Lett. 2(16), 2411-2414.

  35. "Interactions of GroEL/GroES with a heterodimeric intermediate during alpha(2)beta(2) assembly of mitochondrial branched-chain alpha-ketoacid dehydrogenase - cis capping of the native-like 86-kDa intermediate by GroES"
    Song, JL; Wynn, RM; Chuang, DT (2000)
    J. Biol. Chem. 275(29), 22305-22312.

  36. "Alkaline proteinase inhibitor of Pseudomonas aeruginosa - Interaction of native and N-terminally truncated inhibitor proteins with Pseudomonas metalloproteinases"
    Feltzer, RE; Gray, RD; Dean, WL; Pierce, WM (2000)
    J. Biol. Chem. 275(28), 21002-21009.

  37. "Degradation of phytochrome A and the high irradiance response in Arabidopsis: a kinetic analysis"
    Hennig, L; Buche, C; Schafer, E (2000)
    Plant Cell Environ. 23(7), 727-734.

  38. "Characteristics of L-ornithine: 2-oxoacid aminotransferase and potential prenatal diagnosis of gyrate atrophy of the choroid and retina by first trimester chorionic villus sampling"
    Roschinger, W; Endres, W; Shin, YS (2000)
    Clin. Chim. Acta 296(1-2), 91-100.

  39. "Dissecting the nucleotide binding properties of Escherichia coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase with fluorescent 3 '(2)'-o-anthraniloyladenosine 5 '-triphosphate"
    Shi, GB; Gong, YC; Savchenko, A; Zeikus, JG; Xiao, B; Ji, XH; Yan, HG (2000)
    Biochim. Biophys. Acta-Protein Struct. Molec. Enzym. 1478(2), 289-299.

  40. "Mechanism of neomycin and Rev peptide binding to the Rev responsive element of HIV-1 as determined by fluorescence and NMR spectroscopy"
    Lacourciere, KA; Stivers, JT; Marino, JP (2000)
    Biochemistry 39(19), 5630-5641.

  41. "Transient kinetics of ligand binding and role of the C-terminus in the dUTPase from equine infectious anemia virus"
    Nord, J; Kiefer, M; Adolph, HW; Zeppezauer, MM; Nyman, PO (2000)
    FEBS Lett. 472(2-3), 312-316.

  42. "A novel approach to serine protease inhibition: Kinetic characterization of inhibitors whose potencies and selectivities are dramatically enhanced by zinc(II)"
    Janc, JW; Clark, JM; Warne, RL; Elrod, KC; Katz, BA; Moore, WR (2000)
    Biochemistry 39(16), 4792-4800.

  43. "Structural basis for selectivity of a small molecule, S1- binding, submicromolar inhibitor of urokinase-type plasminogen activator"
    Katz, BA; Mackman, R; Luong, C; Radika, K; Martelli, A; Sprengeler, PA; Wang, J; Chan, HD; Wong, L (2000)
    Chem. Biol. 7(4), 299-312.

  44. "Osmotic pressure effects on EcoRV cleavage and binding"
    Wenner, JR; Bloomfield, VA (1999)
    J. Biomol. Struct. Dyn. 17(3), 461-471.

  45. "GroEL/GroES promote dissociation/reassociation cycles of a heterodimeric intermediate during alpha(2)beta(2) protein assembly - Iterative annealing at the quaternary structure level"
    Wynn, RM; Song, JL; Chuang, DT (2000)
    J. Biol. Chem. 275(4), 2786-2794.

  46. "Hydrophilic residues at the apical domain of GroEL contribute to GroES finding but attenuate polypeptide binding"
    Motojima, F; Makio, T; Aoki, K; Makino, Y; Kuwajima, K; Yoshida, M (2000)
    Biochem. Biophys. Res. Commun. 267(3), 842-849.

  47. "Kinetic modelling in food science: a case study on chlorophyll degradation in olives"
    van Boekel, MAJS (2000)
    J. Sci. Food Agric. 80(1), 3-9.

  48. "Microcomputer applications in biochemistry"
    Tsai, CS (2000)
    J. Chem. Educ. 77(2), 219-221.

  49. "Design, synthesis, and evaluation of 9-D-ribityl-1,3,7- trihydro-2,6,8-purinetrione, a potent inhibitor of riboflavin synthase and lumazine synthase"
    Cushman, M; Yang, DL; Kis, K; Bacher, A (2001)
    J. Org. Chem. 66(25), 8320-8327.

  50. "The conserved methionine residue of the metzincins: A site- directed mutagenesis study"
    Hege, T; Baumann, U (2001)
    J. Mol. Biol. 314(2), 181-186.

  51. "Protease C of Erwinia chrysanthemi: The crystal structure and role of amino acids Y228 and E189"
    Hege, T; Baumann, U (2001)
    J. Mol. Biol. 314(2), 187-193.

  52. "Cargo delivery kinetics of cell-penetrating peptides"
    Hallbrink, M; Floren, A; Elmquist, A; Pooga, M; Bartfai, T; Langel, U (2001)
    Biochim. Biophys. Acta-Biomembr. 1515(2), 101-109.

  53. "Substrate recognition and selection by the initiation module PheATE of gramicidin S synthetase"
    Luo, LS; Burkart, MD; Stachelhaus, T; Walsh, CT (2001)
    J. Am. Chem. Soc. 123(45), 11208-11218.

  54. "Histidine 90 function in 4-chlorobenzoyl-coenzyme a dehalogenase catalysis"
    Zhang, WH; Wei, YS; Luo, LS; Taylor, KL; Yang, G; Dunaway-Mariano, D; Benning, MM; Holden, HM (2001)
    Biochemistry 40(45), 13474-13482.

  55. "Kinetic analysis of the action of P-site analogs"
    Dessauer, CW (2002)
    METHODS IN ENZYMOLOGY 345, 112-126.

  56. "Mechanism of inhibition of the class C beta-lactamase of Enterobacter cloacae P99 by cyclic acyl phosph(on)ates: Rescue by return"
    Kaur, K; Lan, MJK; Pratt, RF (2001)
    J. Am. Chem. Soc. 123(43), 10436-10443.

  57. "Actinopolyspora halophila has two separate pathways for betaine synthesis"
    Nyyssola, A; Leisola, M (2001)
    Arch. Microbiol. 176(4), 294-300.

  58. "Inverse acyl phosph(on)ates: Substrates or inhibitors of beta- lactam-recognizing enzymes?"
    Morrison, MJ; Li, NX; Pratt, RF (2001)
    Bioorganic Chem. 29(5), 271-281.

  59. "Effectors of HIV-1 protease peptidolytic activity"
    Porter, DJT; Hanlon, MH; Carter, LH; Danger, DP; Furfine, ES (2001)
    Biochemistry 40(37), 11131-11139.

  60. "Kinetic competence of the cADP-ribose-CD38 complex as an intermediate in the CD38/NAD(+) glycohydrolase-catalysed reactions: implication for CD38 signalling"
    Cakir-Kiefer, I; Muller-Steffner, H; Oppenheimer, N; Schuber, F (2001)
    Biochem. J. 358(Pt. 2), 399-406.

  61. "Conjugation of haloalkanes by bacterial and mammalian glutathione transferases: Mono- and vicinal dihaloethanes"
    Wheeler, JB; Stourman, NV; Armstrong, RN; Guengerich, FP (2001)
    Chem. Res. Toxicol. 14(8), 1107-1117.

  62. "Characterization of the binding of deuteroporphyrin IX to the magnesium chelatase H subunit and spectroscopic properties of the complex"
    Karger, GA; Reid, JD; Hunter, CN (2001)
    Biochemistry 40(31), 9291-9299.

  63. "Characterisation of the structure of ocr, the gene 0.3 protein of bacteriophage T7"
    Atanasiu, C; Byron, O; McMiken, H; Sturrock, SS; Dryden, DTF (2001)
    Nucleic Acids Res. 29(14), 3059-3068.

  64. "A kinetic study of competing fragmentation and hydrolyses of phenyl hydrogen alpha-hydroxyiminobenzylphosphonate - a case of acid mediated inhibition of acid catalysis"
    Ta-Shma, R; Schneider, H; Mahajna, M; Katzhendler, J; Breuer, E (2001)
    J. Chem. Soc.-Perkin Trans. 2 (8), 1404-1407.

  65. "Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation"
    Foster, JE; Holmes, SF; Erie, DA (2001)
    Cell 106(2), 243-252.

  66. "The ATPase reaction cycle of yeast DNA topoisomerase II - Slow rates of ATP resynthesis and P-i release"
    Baird, CL; Gordon, MS; Andrenyak, DM; Marecek, JF; Lindsley, JE (2001)
    J. Biol. Chem. 276(30), 27893-27898.

  67. "High enzymatic activity and chaperone function are mechanistically related features of the dimeric E-coli peptidyl-prolyl-isomerase FkpA"
    Ramm, K; Pluckthun, A (2001)
    J. Mol. Biol. 310(2), 485-498.

  68. "Reduction of aflatoxin B-1 dialdehyde by rat and human aldo- keto reductases"
    Guengerich, FP; Cai, HL; McMahon, M; Hayes, JD; Sutter, TR; Groopman, JD; Deng, ZW; Harris, TM (2001)
    Chem. Res. Toxicol. 14(6), 727-737.

  69. "The mechanism of DNA cytosine-5 methylation - Kinetic and mutational dissection of HhaI methyltransferase"
    Vilkaitis, G; Merkiene, E; Serva, S; Weinhold, E; Klimasauskas, S (2001)
    J. Biol. Chem. 276(24), 20924-20934.

  70. "Binding and oxidation of alkyl 4-nitrophenyl ethers by rabbit cytochrome P450 1A2: Evidence for two binding sites"
    Miller, GP; Guengerich, FP (2001)
    Biochemistry 40(24), 7262-7272.

  71. "Examination of donor substrate conversion in yeast transketolase"
    Fiedler, E; Golbik, R; Schneider, G; Tittmann, K; Neef, H; Konig, S; Hubner, G (2001)
    J. Biol. Chem. 276(19), 16051-16058.

  72. "Kinetic analysis of three activated phenylalanyl intermediates generated by the initiation module PheATE of gramicidin S synthetase"
    Luo, LS; Walsh, CT (2001)
    Biochemistry 40(18), 5329-5337.

  73. "Characterization of glycine sarcosine N-methyltransferase and sarcosine dimethylglycine N-methyltransferase"
    Nyyssola, A; Reinikainen, T; Leisola, M (2001)
    Appl. Environ. Microbiol. 67(5), 2044-2050.

  74. "Mechanism of reaction of acyl phosph(on)ates with the beta- lactamase of Enterobacter cloacae P99"
    Kaur, K; Pratt, RF (2001)
    Biochemistry 40(15), 4610-4621.

  75. "Spectroscopic properties of the metalloregulatory Cd(II) and Pb(II) sites of S. aureus pI258 CadC"
    Busenlehner, LS; Cosper, NJ; Scott, RA; Rosen, BP; Wong, MD; Giedroc, DP (2001)
    Biochemistry 40(14), 4426-4436.

  76. "Oxidations of p-alkoxyacylanilides catalyzed by human cytochrome P450 1A2: Structure-activity relationships and simulation of rate constants of individual steps in catalysis"
    Yun, CH; Miller, GP; Guengerich, FP (2001)
    Biochemistry 40(14), 4521-4530.

  77. "Acetohydroxyacid synthase: A proposed structure for regulatory subunits supported by evidence from mutagenesis"
    Mendel, S; Elkayam, T; Sella, C; Vinogradov, V; Vyazmensky, M; Chipman, DM; Barak, Z (2001)
    J. Mol. Biol. 307(1), 465-477.

  78. "Chain length-dependent affinity of helical foldamers for a rodlike guest"
    Tanatani, A; Mio, MJ; Moore, JS (2001)
    J. Am. Chem. Soc. 123(8), 1792-1793.

  79. "Thermostable and site-specific DNA binding of the gene product ORF56 from the Sulfolobus islandicus plasmid pRN1, a putative archael plasmid copy control protein"
    Lipps, G; Stegert, M; Krauss, G (2001)
    Nucleic Acids Res. 29(4), 904-913.

  80. "Kinetic studies of Fos center dot Jun center dot DNA complex formation: DNA binding prior to dimerization"
    Kohler, JJ; Schepartz, A (2001)
    Biochemistry 40(1), 130-142.

  81. "The N-terminal region of cystatin A (stefin A) binds to papain subsequent to the two hairpin loops of the inhibitor. Demonstration of two-step binding by rapid-kinetic studies of cystatin A labeled at the N-terminus with a fluorescent reporter group"
    Estrada, S; Olson, ST; Raub-Segall, E; Bjork, I (2000)
    Protein Sci. 9(11), 2218-2224.

  82. "Degradation of chlortoluron in water disinfection processes: a kinetic study"
    Losito, H; Zambonin, CG; Palmisano, F (2000)
    J. Environ. Monit. 2(6), 582-586.

  83. "The neutrophil lipocalin NGAL is a bacteriostatic agent that interferes with siderophore-mediated iron acquisition"
    Goetz, DH; Holmes, MA; Borregaard, N; Bluhm, ME; Raymond, KN; Strong, RK (2002)
    Mol. Cell 10(5), 1033-1043.

  84. "Urate oxidase: Single-turnover stopped-flow techniques for detecting two discrete enzyme-bound intermediates"
    Tipton, PA (2002)
    METHODS IN ENZYMOLOGY 354, 310-319.

  85. "The role of the factor X activation peptide: A deletion mutagenesis approach"
    Rudolph, AE; Mullane, MP; Porche-Sorbet, R; Daust, HA; Miletich, JP (2002)
    Thromb. Haemost. 88(5), 756-762.

  86. "Kinetic modeling of reactions in heated monosaccharide-casein systems"
    Brands, CMJ; van Boekel, MAJS (2002)
    J. Agric. Food Chem. 50(23), 6725-6739.

  87. "The dual-specific active site of 7,8-diaminopelargonic acid synthase and the effect of the R391A mutation"
    Eliot, AC; Sandmark, J; Schneider, G; Kirsch, JF (2002)
    Biochemistry 41(42), 12582-12589.

  88. "The glucose-specific carrier of the Escherichia coli phosphotransferase system - Synthesis of selective inhibitors and inactivation studies"
    Garcia-Alles, LF; Navdaeva, V; Haenni, S; Erni, B (2002)
    Eur. J. Biochem. 269(20), 4969-4980.

  89. "Incorporation of an amide into 5-phosphonoalkyl-6-D- ribitylaminopyrimidinedione lumazine synthase inhibitors results in an unexpected reversal of selectivity for riboflavin synthase vs lumazine synthase"
    Cushman, M; Yang, DL; Mihalic, JT; Chen, JH; Gerhardt, S; Huber, R; Fischer, M; Kis, K; Bacher, A (2002)
    J. Org. Chem. 67(20), 6871-6877.

  90. "Prothrombinase assembly and S1 site occupation restore the catalytic activity of FXa impaired by mutation at the sodium- binding site"
    Camire, RM (2002)
    J. Biol. Chem. 277(40), 37863-37870.

  91. "Oxidation of methoxyphenethylamines by cytochrome p450 2D6 - Analysis of rate-limiting steps"
    Guengerich, FP; Miller, GP; Hanna, IH; Sato, H; Martin, MV (2002)
    J. Biol. Chem. 277(37), 33711-33719.

  92. "Mutational analysis of the base-flipping mechanism of uracil DNA glycosylase"
    Jiang, YL; Stivers, JT (2002)
    Biochemistry 41(37), 11236-11247.

  93. "Diversity in the oxidation of substrates by cytochrome P450 2D6: Lack of an obligatory role of aspartate 301 - Substrate electrostatic bonding"
    Guengerich, FP; Miller, GP; Hanna, IH; Martin, MV; Leger, S; Black, C; Chauret, N; Silva, JM; Trimble, LA; Yergey, JA; Nicoll-Griffith, DA (2002)
    Biochemistry 41(36), 11025-11034.

  94. "Effect of sequence polymorphism and drug resistance on two HIV- 1 Gag processing sites"
    Feher, A; Weber, IT; Bagossi, P; Boross, P; Mahalingam, B; Louis, JM; Copeland, TD; Torshin, IY; Harrison, RW; Tozser, J (2002)
    Eur. J. Biochem. 269(16), 4114-4120.

  95. "Design, synthesis, and evaluation of 6-carboxyalkyl and 6- phosphonoxyalkyl derivatives of 7-oxo-8-ribitylaminolumazines as inhibitors of riboflavin synthase and lumazine synthase"
    Cushman, M; Yang, DL; Gerhardt, S; Huber, R; Fischer, M; Kis, K; Bacher, A (2002)
    J. Org. Chem. 67(16), 5807-5816.

  96. "Structural characterization of distinct alpha 3N and alpha 5 metal sites in the cyanobacterial zinc sensor SmtB"
    VanZile, ML; Chen, XH; Giedroc, DP (2002)
    Biochemistry 41(31), 9765-9775.

  97. "Allosteric negative regulation of smt O/P binding of the zinc sensor, SmtB, by metal ions: A coupled equilibrium analysis"
    VanZile, ML; Chen, XH; Giedroc, DP (2002)
    Biochemistry 41(31), 9776-9786.

  98. "Sugar recognition by the glucose and mannose permeases of Escherichia coli. Steady-state kinetics and inhibition studies"
    Garcia-Alles, LF; Zahn, A; Erni, B (2002)
    Biochemistry 41(31), 10077-10086.

  99. "Analysis of copper complex lability using Cu-64-equilibration techniques and free-ion selective radiotracer extraction"
    van Doornmalen, J; Wolterbeek, HT; de Goeij, JJM (2002)
    Anal. Chim. Acta 464(1), 141-152.

  100. "Metabolomics: quantification of intracellular metabolite dynamics"
    Buchholz, A; Hurlebaus, J; Wandrey, C; Takors, R (2002)
    Biomol. Eng. 19(1), 5-15.

  101. "High-level production of D-mannitol with membrane cell-recycle bioreactor"
    von Weymarn, N; Kiviharju, K; Leisola, M (2002)
    J. Ind. Microbiol. Biotechnol. 29(1), 44-49.

  102. "Nematode anticoagulant protein c2 reveals a site on factor Xa that is important for macromolecular substrate binding to human prothrombinase."
    Buddai, SK; Toulokhonova, L; Bergum, PW; Vlasuk, GP; Krishnaswamy, S (2002)
    J. Biol. Chem. 277(29), 26689-26698.

  103. "Timing of epimerization and condensation reactions in nonribosomal peptide assembly lines: Kinetic analysis of phenylalanine activating elongation modules of tyrocidine synthetase B"
    Luo, LS; Kohli, RM; Onishi, M; Linne, U; Marahiel, MA; Walsh, CT (2002)
    Biochemistry 41(29), 9184-9196.

  104. "Chemical transformation is not rate-limiting in the reaction catalyzed by Escherichia coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase"
    Li, Y; Gong, YC; Shi, GB; Blaszczyk, J; Ji, XH; Yan, HG (2002)
    Biochemistry 41(27), 8777-8783.

  105. "F-1-ATPase changes its conformations upon phosphate release"
    Masaike, T; Muneyuki, E; Noji, H; Kinosita, K; Yoshida, M (2002)
    J. Biol. Chem. 277(24), 21643-21649.

  106. "Elucidation of primary (alpha N-3) and vestigial (alpha(5)) heavy metal-binding sites in Staphylococcus aureus pI258 CadC: Evolutionary implications for metal ion selectivity of ArsR/SmtB metal sensor proteins"
    Busenlehner, LS; Weng, TC; Penner-Hahn, JE; Giedroc, DP (2002)
    J. Mol. Biol. 319(3), 685-701.

  107. "Reaction of aflatoxin B-1 oxidation products with lysine"
    Guengerich, FP; Arneson, KO; Williams, KM; Deng, ZW; Harris, TM (2002)
    Chem. Res. Toxicol. 15(6), 780-792.

  108. "C-2 epimer formation of tetrose, pentose and hexose sugars by xylose isomerase"
    Vuolanto, A; Pastinen, O; Schoemaker, HE; Leisola, M (2002)
    Biocatal. Biotransform. 20(4), 235-240.

  109. "The hsp70 chaperone DnaK is a secondary amide peptide bond cis- trans isomerase"
    Schiene-Fischer, C; Habazettl, J; Schmid, FX; Fischer, G (2002)
    Nat. Struct. Biol. 9(6), 419-424.

  110. "Synthesis and self-association of an imine-containing m- phenylene ethynylene macrocycle"
    Zhao, DH; Moore, JS (2002)
    J. Org. Chem. 67(11), 3548-3554.

  111. "Inhibition of uracil DNA glycosylase by an oxacarbenium ion mimic"
    Jiang, YL; Ichikawa, Y; Stivers, JT (2002)
    Biochemistry 41(22), 7116-7124.

  112. "The size-selective synthesis of folded oligomers by dynamic templation"
    Nishinaga, T; Tanatani, A; Oh, KC; Moore, JS (2002)
    J. Am. Chem. Soc. 124(21), 5934-5935.

  113. "Formation and structure of 1 : 1 complexes between aryl hydroxamic acids and vanadate at neutral pH"
    Bell, JH; Pratt, RF (2002)
    Inorg. Chem. 41(10), 2747-2753.

  114. "Selective inhibition of the C-domain of angiotensin I converting enzyme by bradykinin potentiating peptides"
    Cotton, J; Hayashi, MAF; Cuniasse, P; Vazeux, G; Ianzer, D; De Camargo, ACM; Dive, V (2002)
    Biochemistry 41(19), 6065-6071.

  115. "Characterization of the protrimer intermediate in the folding pathway of the interdigitated beta-helix tailspike protein"
    Benton, CB; King, J; Clark, PL (2002)
    Biochemistry 41(16), 5093-5103.

  116. "Hydrolysis of the 5 '-p-nitrophenyl ester of TMP by the proofreading exonuclease (epsilon) subunit of Escherichia coli DNA polymerase III"
    Hamdan, S; Bulloch, EM; Thompson, PR; Beck, JL; Yang, JY; Crowther, JA; Lilley, PE; Carr, PD; Ollis, DL; Brown, SE; Dixon, NE (2002)
    Biochemistry 41(16), 5266-5275.

  117. "Characterization of a metalloregulatory bismuth(III) site in Staphylococcus aureus pI258 CadC repressor"
    Busenlehner, LS; Apuy, JL; Giedroc, DP (2002)
    J. Biol. Inorg. Chem. 7(4-5), 551-559.

  118. "Mechanism of inhibition of the beta-lactamase of Enterobacter cloacae P99 by 1 : 1 complexes of vanadate with hydroxamic acid"
    Bell, JH; Pratt, RF (2002)
    Biochemistry 41(13), 4329-4338.

  119. "Candida guilliermondii grows on rare pentoses - implications for production of pure xylitol"
    Granstrom, T; Airaksinen, U; Wu, XY; Leisola, M (2002)
    Biotechnol. Lett. 24(7), 507-510.

  120. "Identification of residues critical for activity of the wound- induced leucine aminopeptidase (LAP-A) of tomato"
    Gu, YQ; Walling, LL (2002)
    Eur. J. Biochem. 269(6), 1630-1640.

  121. "The contribution of factor Xa to exosite-dependent substrate recognition by prothrombinase"
    Wilkens, M; Krishnaswamy, S (2002)
    J. Biol. Chem. 277(11), 9366-9374.

  122. "Why OrfY? Characterization of MMOD, a long overlooked component of the soluble methane monooxygenase from Methylococcus capsulatus (Bath)"
    Merkx, M; Lippard, SJ (2002)
    J. Biol. Chem. 277(8), 5858-5865.

  123. "Molecular characterization of Ancylostoma inhibitors of coagulation factor Xa - Hookworm anticoagulant activity in vitro predicts parasite bloodfeeding in vivo"
    Harrison, LM; Nerlinger, A; Bungiro, RD; Cordova, JL; Kuzmic, P; Cappello, M (2002)
    J. Biol. Chem. 277(8), 6223-6229.

  124. "Concerted and stepwise dehydration mechanisms observed in wild- type and mutated Escherichia coli dTDP-glucose 4,6-dehydratase"
    Hegeman, AD; Gross, JW; Frey, PA (2002)
    Biochemistry 41(8), 2797-2804.

  125. "HIV-1 protease: Characterization of a catalytically competent enzyme-substrate intermediate"
    Porter, DJT; Hanlon, MH; Furfine, ES (2002)
    Biochemistry 41(4), 1302-1307.

  126. "Foldamers as dynamic receptors: Probing the mechanism of molecular association between helical oligomers and rodlike ligands"
    Tanatani, A; Hughes, TS; Moore, JS (2001)
    Angew. Chem.-Int. Edit. 41(2), 325-+.

  127. "Misincorporation and stalling at O-6-methylguanine and O-6- benzylguanine: Evidence for inactive polymerase complexes"
    Woodside, AM; Guengerich, FP (2002)
    Biochemistry 41(3), 1039-1050.

  128. "Inhibition of bacteriophage lambda protein phosphatase by organic and oxoanion inhibitors"
    Reiter, NJ; White, DJ; Rusnak, F (2002)
    Biochemistry 41(3), 1051-1059.

  129. "Wettability of heterogeneous substrates"
    Voue, M; Bauthier, C; Vega, MJ; De Connick, J (2001)
    Phys. Status Solidi A-Appl. Res. 188(4), 1345-1351.

  130. "Arp2/3 complex requires hydrolyzable ATP for nucleation of new actin filaments"
    Dayel, MJ; Holleran, EA; Mullins, RD (2001)
    Proc. Natl. Acad. Sci. U. S. A. 98(26), 14871-14876.

  131. "The total quasi-steady-state approximation is valid for reversible enzyme kinetics"
    Tzafriri, AR; Edelman, ER (2004)
    J. Theor. Biol. 226(3), 303-313.

  132. "Inhibition of fructose-1,6-bisphosphatase by a new class of allosteric effectors"
    Choe, JY; Nelson, SW; Arienti, KL; Axe, FU; Collins, TL; Jones, TK; Kimmich, RDA; Newman, MJ; Norvell, K; Ripka, WC; Romano, SJ; Short, KM; Slee, DH; Fromm, HJ; Honzatko, RB (2003)
    J. Biol. Chem. 278(51), 51176-51183.

  133. "Cobalt(II) dioxygen carriers based on simple diamino ligands: Kinetic and ab initio studies"
    Comuzzi, C; Melchior, A; Polese, P; Portanova, R; Tolazzi, M (2003)
    Inorg. Chem. 42(25), 8214-8222.

  134. "Analysis of the kinetic mechanism of haloalkane conjugation by mammalian theta-class glutathione transferases"
    Guengerich, FP; McCormick, WA; Wheeler, JB (2003)
    Chem. Res. Toxicol. 16(11), 1493-1499.

  135. "Chimeric ribonuclease as a source of human adapter protein for targeted drug delivery"
    Gaynutdinov, TI; Myshkin, E; Backer, JM; Backer, MV (2003)
    Protein Eng. 16(10), 771-775.

  136. "Presteady state kinetic analysis of riboflavin synthase"
    Illarionov, B; Haase, I; Bacher, A; Fischer, M; Schramek, N (2003)
    J. Biol. Chem. 278(48), 47700-47706.

  137. "DNA-binding and oligomerization studies of the manganese(II) metalloregulatory protein MntR from Bacillus subtilis"
    Lieser, SA; Davis, TC; Helmann, JD; Cohen, SM (2003)
    Biochemistry 42(43), 12634-12642.

  138. "Kinetic analysis of the 4-methylideneimidazole-5-one-containing tyrosine aminomutase in enediyne antitumor antibiotic C-1027 biosynthesis"
    Christenson, SD; Wu, WM; Spies, MA; Shen, B; Toney, MD (2003)
    Biochemistry 42(43), 12708-12718.

  139. "Reactivity of acrylate-terminated Au nanoparticles: Suppressed intramolecular catalysis and lack of cooperative effect"
    Koenig, S; Chechik, V (2003)
    Langmuir 19(22), 9511-9517.

  140. "Bacteriophage T4Dam (DNA-(adenine-N-6)-methyltransferase) - Evidence for two distinct stages of methylation under single turnover conditions"
    Malygin, EG; Lindstrom, WM; Zinoviev, VV; Evdokimov, AA; Schlagman, SL; Reich, NO; Hattman, S (2003)
    J. Biol. Chem. 278(43), 41749-41755.

  141. "A model for the activation of plasma membrane calcium pump isoform 4b by calmodulin"
    Penheiter, AR; Bajzer, E; Filoteo, AG; Thorogate, R; Torok, K; Caride, AJ (2003)
    Biochemistry 42(41), 12115-12124.

  142. "Zinc fingers can act as Zn2+ sensors to regulate transcriptional activation domain function"
    Bird, AJ; McCall, K; Kramer, M; Blankman, E; Winge, DR; Eide, DJ (2003)
    Embo J. 22(19), 5137-5146.

  143. "Fatty acid-binding proteins inhibit hydration of epoxyeicosatrienoic acids by soluble epoxide hydrolase"
    Widstrom, RL; Norris, AW; Van Der Veer, J; Spector, AA (2003)
    Biochemistry 42(40), 11762-11767.

  144. "Downstream DNA sequence effects on transcription elongation - Allosteric binding of nucleoside triphosphates facilitates translocation via a ratchet motion"
    Holmes, SF; Erie, DA (2003)
    J. Biol. Chem. 278(37), 35597-35608.

  145. "Pre-steady-state and steady-state kinetic analysis of E-coli class I ribonucleotide reductase"
    Ge, J; Yu, GX; Ator, MA; Stubbe, J (2003)
    Biochemistry 42(34), 10071-10083.

  146. "On the substrate specificity of bacterial DD-peptidases: evidence from two series of peptidoglycan-mimetic peptides"
    Anderson, JW; Adediran, SA; Charlier, P; Nguyen-Disteche, M; Frere, JM; Nicholas, RA; Pratt, RF (2003)
    Biochem. J. 373(Pt. Part 3), 949-955.

  147. "Biochemical and functional analyses of the Mip protein: Influence of the N-terminal half and of peptidylprolyl isomerase activity on the virulence of Legionella pneumophila"
    Kohler, R; Fanghanel, J; Konig, B; Luneberg, E; Frosch, M; Rahfeld, JU; Hilgenfeld, R; Fischer, G; Hacker, J; Steinert, M (2003)
    Infect. Immun. 71(8), 4389-4397.

  148. "Alkaline proteinase inhibitor of Pseudomonas aeruginosa - A mutational and molecular dynamics study of the role of N-terminal residues in the inhibition of Pseudomonas alkaline proteinase"
    Feltzer, RE; Trent, JO; Gray, RD (2003)
    J. Biol. Chem. 278(28), 25952-25957.

  149. "Proflavine acts as a Rev inhibitor by targeting the high-affinity Rev binding site of the Rev responsive element of HIV-1"
    DeJong, ES; Chang, CE; Gilson, MK; Marino, JP (2003)
    Biochemistry 42(26), 8035-8046.

  150. "Steady-state and pre-steady-state kinetic analysis of halopropane conversion by a Rhodococcus haloalkane dehalogenase"
    Bosma, T; Pikkemaat, MG; Kingma, J; Dijk, J; Janssen, DB (2003)
    Biochemistry 42(26), 8047-8053.

  151. "Structural and thermodynamic dissection of specific mannan recognition by a carbohydrate binding module, TmCBM27"
    Boraston, AB; Revett, TJ; Boraston, CM; Nurizzo, D; Davies, GJ (2003)
    Structure 11(6), 665-675.

  152. "New substrates for beta-lactam-recognizing enzymes: Aryl malonamates"
    Cabaret, D; Adediran, SA; Pratt, RF; Wakselman, M (2003)
    Biochemistry 42(22), 6719-6725.

  153. "Preparation and characterization of a 5 '-deazaFAD T491V NADPH-cytochrome P450 reductase"
    Zhang, HM; Gruenke, L; Saribas, AS; Im, SC; Shen, AL; Kasper, CB; Waskell, L (2003)
    Biochemistry 42(22), 6804-6813.

  154. "Mining HIV dynamics using independent component analysis"
    Draghici, S; Graziano, F; Kettoola, S; Sethi, I; Towfic, G (2003)
    Bioinformatics 19(8), 981-986.

  155. "Humanized docking system for assembly of targeting drug delivery complexes"
    Backer, MV; Gaynutdinov, TI; Gorshkova, II; Crouch, RJ; Hu, T; Aloise, R; Arab, M; Przekop, K; Backer, JA (2003)
    J. Control. Release 89(3), 499-511.

  156. "NTP-driven translocation by human RNA polymerase II"
    Nedialkov, YA; Gong, XQ; Hovde, SL; Yamaguchi, Y; Handa, H; Geiger, JH; Yan, HG; Burton, ZF (2003)
    J. Biol. Chem. 278(20), 18303-18312.

  157. "Decorin binds fibrinogen in a Zn2+-dependent interaction"
    Dugan, TA; Yang, VWC; McQuillan, DJ; Hook, M (2003)
    J. Biol. Chem. 278(16), 13655-13662.

  158. "Enzyme I of the phosphotransferase system: Induced-fit protonation of the reaction transition state by Cys-502"
    Garcia-Alles, LF; Alfonso, I; Erni, B (2003)
    Biochemistry 42(16), 4744-4750.

  159. "Structural elements of metal selectivity in metal sensor proteins"
    Pennella, MA; Shokes, JE; Cosper, NJ; Scott, RA; Giedroc, DP (2003)
    Proc. Natl. Acad. Sci. U. S. A. 100(7), 3713-3718.

  160. "The metal-independent type IIs restriction enzyme BfiI is a dimer that binds two DNA sites but has only one catalytic centre"
    Lagunavicius, A; Sasnauskas, G; Halford, SE; Siksnys, V (2003)
    J. Mol. Biol. 326(4), 1051-1064.

  161. "Powering DNA repair through substrate-electrostatic interactions"
    Jiang, YL; Ichikawa, Y; Song, F; Stivers, JT (2003)
    Biochemistry 42(7), 1922-1929.

  162. "Biochemical characterization of interactions between DNA polymerase and single-stranded DNA-binding protein in bacteriophage RB69"
    Sun, SY; Shamoo, Y (2003)
    J. Biol. Chem. 278(6), 3876-3881.

  163. "Inhibition of beta-lactamases by monocyclic acyl phosph(on)ates"
    Kaur, K; Adediran, SA; Lan, MJK; Pratt, RF (2003)
    Biochemistry 42(6), 1529-1536.

  164. "Catalytic roles of arginine residues 82 and 92 of Escherichia coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: Site-directed mutagenesis and biochemical studies"
    Li, Y; Wu, Y; Blaszczyk, J; Ji, XH; Yan, HG (2003)
    Biochemistry 42(6), 1581-1588.

  165. "SOLVERSTAT: a new utility for multipurpose analysis. An application to the investigation of dioxygenated Co(II) complex formation in dimethylsulfoxide solution"
    Comuzzi, C; Polese, P; Melchior, A; Portanova, R; Tolazzi, M (2003)
    Talanta 59(1), 67-80.

  166. "tmRNA from Thermus thermophilus - Interaction with alanyl-tRNA synthetase and elongation factor Tu"
    Stepanov, VG; Nyborg, J (2003)
    Eur. J. Biochem. 270(3), 463-475.

  167. "Routes to S-nitroso-hemoglobin formation with heme redox and preferential reactivity in the beta subunits"
    Luchsinger, BP; Rich, EN; Gow, AJ; Williams, EM; Stamler, JS; Singel, DJ (2003)
    Proc. Natl. Acad. Sci. U. S. A. 100(2), 461-466.

  168. "The N-terminal domain of the regulatory subunit is sufficient for complete activation of acetohydroxyacid synthase III from Escherichia coli"
    Mendel, S; Vinogradov, M; Vyazmensky, M; Chipman, DM; Barak, Z (2003)
    J. Mol. Biol. 325(2), 275-284.

  169. "Engineering S-protein fragments of bovine ribonuclease A for targeted drug delivery"
    Backer, MV; Gaynutdinov, TI; Aloise, R; Przekop, K; Backer, JM (2002)
    Protein Expr. Purif. 26(3), 455-461.

  170. "Evaluation of similarities in the cis/trans isomerase function of trigger factor and DnaK"
    Schiene-Fischer, C; Habazettl, J; Tradler, T; Fischer, G (2002)
    Biol. Chem. 383(12), 1865-1873.

  171. "Kinetic analysis of R67 dihydrofolate reductase folding: From the unfolded monomer to the native tetramer"
    Bodenreider, C; Kellershohn, N; Goldberg, ME; Mejean, A (2002)
    Biochemistry 41(50), 14988-14999.

  172. "Ribonuclease activity of vaccinia DNA topoisomerase IB: Kinetic and high-throughput inhibition studies using a robust continuous fluorescence assay"
    Kwon, K; Nagarajan, R; Stivers, JT (2004)
    Biochemistry 43(47), 14994-15004.

  173. "Alleviation of restriction by DNA condensation and non-specific DNA binding ligands"
    Keatch, SA; Su, TJ; Dryden, DTF (2004)
    Nucleic Acids Res. 32(19), 5841-5850.

  174. "Residues within the B ' motif are critical for DNA binding by the superfamily 3 helicase Rep40 of adeno-associated virus type 2"
    Yoon-Robarts, M; Blouin, AG; Bleker, S; Kleinschmidt, JA; Aggarawal, AK; Escalante, CR; Linden, RM (2004)
    J. Biol. Chem. 279(48), 50472-50481.

  175. "Inhibition of wild-type and mutant human immunodeficiency virus type 1 proteases by GW0385 and other arylsulfonamides"
    Hanlon, MH; Porter, DJT; Furfine, ES; Spaltenstein, A; Carter, HL; Danger, D; Shu, AYL; Kaldor, IW; Miller, JF; Samano, VA (2004)
    Biochemistry 43(45), 14500-14507.

  176. "Staphylococcus aureus AgrA binding to the RNAIII-agr regulatory region"
    Koenig, RL; Ray, JL; Maleki, SJ; Smeltzer, MS; Hurlburt, BK (2004)
    J. Bacteriol. 186(22), 7549-7555.

  177. "Synthesis and evaluation of new substrate analogues of Streptomyces R61 DD-peptidase: Dissection of a specific ligand"
    Nagarajan, R; Pratt, RF (2004)
    J. Org. Chem. 69(22), 7472-7478.

  178. "A fluorescent alpha-factor analogue exhibits multiple steps on binding to its G protein coupled receptor in yeast"
    Bajaj, A; Celic, A; Ding, FX; Naider, F; Becker, JM; Dumont, ME (2004)
    Biochemistry 43(42), 13564-13578.

  179. "Design, synthesis, and evaluation of acyclic C-nucleoside and N-methylated derivatives of the ribitylaminopyrimidine substrate of lumazine synthase as potential enzyme inhibitors and mechanistic probes"
    Chen, JH; Sambaiah, T; Illarionov, B; Fischer, M; Bacher, A; Cushman, M (2004)
    J. Org. Chem. 69(21), 6996-7003.

  180. "IspH protein of Escherichia coli: Studies on iron-sulfur cluster implementation and catalysis"
    Grawert, T; Kaiser, J; Zepeck, F; Laupitz, R; Hecht, S; Amslinger, S; Schramek, N; Schleicher, E; Weber, S; Haslbeck, M; Buchner, J; Rieder, C; Arigoni, D; Bacher, A; Eisenreich, W; Rohdich, F (2004)
    J. Am. Chem. Soc. 126(40), 12847-12855.

  181. "Transcription factors IIF and US and nucleoside triphosphate substrates as dynamic probes of the human RNA polymerase II mechanism"
    Zhang, CF; Burton, ZF (2004)
    J. Mol. Biol. 342(4), 1085-1099.

  182. "Cobalt(II) and cadmium(II) chelates with nitrogen donors and O-2 bonding to Co(II) derivatives"
    Melchior, A; Peressini, S; Portanova, R; Sangregorio, C; Tavagnacco, C; Tolazzi, M (2004)
    Inorg. Chim. Acta 357(12), 3473-3482.

  183. "Adapter protein for site-specific conjugation of payloads for targeted drug delivery"
    Backer, MV; Gaynutdinov, TI; Patel, V; Jehning, BT; Myshkin, E; Backer, JM (2004)
    Bioconjugate Chem. 15(5), 1021-1029.

  184. "Cryptosporidium parvum IMP dehydrogenase - Identification of functional, structural, and dynamic properties that can be exploited for drug design"
    Umejiego, NN; Li, C; Riera, T; Hedstrom, L; Striepen, B (2004)
    J. Biol. Chem. 279(39), 40320-40327.

  185. "Influence of substrate composition on the helicase activity of transcription termination factor Rho: Reduced processivity of unwinding of RNA-DNA Rho hexamers during hybrid regions"
    Walmacq, C; Rahmouni, AR; Boudvillain, M (2004)
    J. Mol. Biol. 342(2), 403-420.

  186. "Cloning and characterization of a Streptomyces antibioticus ATCC11891 cyclophilin related to Gram negative bacteria cyclophilins"
    Manteca, A; Kamphausen, T; Fanghanel, J; Fischer, G; Sanchez, J (2004)
    FEBS Lett. 572(1-3), 19-26.

  187. "Rate-limiting steps in oxidations catalyzed by rabbit cytochrome P450 1a2"
    Guengerich, FP; Krauser, JA; Johnson, WW (2004)
    Biochemistry 43(33), 10775-10788.

  188. "A proposed reference method for plasminogen activators that enables calculation of enzyme activities in S1 units"
    Longstaff, C; Whitton, CM (2004)
    J. Thromb. Haemost. 2(8), 1416-1421.

  189. "Validation and characterization of uninhibited enzyme kinetics performed in multiwell plates"
    Perdicakis, B; Montgomery, HJ; Guillemette, JG; Jervis, E (2004)
    Anal. Biochem. 332(1), 122-136.

  190. "Enzyme microarrays: On-chip determination of inhibition constants based on affinity-label defection of enzymatic activity"
    Eppinger, J; Funeriu, DP; Miyake, M; Denizot, L; Miyake, J (2004)
    Angew. Chem.-Int. Edit. 43(29), 3806-3810.

  191. "Identification and activity of a series of azole-based compounds with lactate dehydrogenase-directed anti-malarial activity"
    Cameron, A; Read, J; Tranter, R; Winter, VJ; Sessions, RB; Brady, RL; Vivas, L; Easton, A; Kendrick, H; Croft, SL; Barros, D; Lavandera, JL; Martin, JJ; Risco, F; Garcia-Ochoa, S; Gamo, FJ; Sanz, L; Leon, L; Ruiz, JR; Gabarro, R; Mallo, A; de las Heras, FG (2004)
    J. Biol. Chem. 279(30), 31429-31439.

  192. "Slow-binding inhibition - A theoretical and practical course for students"
    Golicnik, M; Stojan, J (2004)
    Biochem. Mol. Biol. Educ. 32(4), 228-235.

  193. "Ubc9-induced inhibition. of diadenosine triphosphate hydrolase activity of the putative tumor suppressor protein Fhit"
    Golebiowski, F; Szulc, A; Szutowicz, A; Pawelczyk, T (2004)
    Arch. Biochem. Biophys. 428(2), 160-164.

  194. "The merits of bipartite transition-state mimics for inhibition of uracil DNA glycosylase"
    Jiang, YL; Cao, CY; Stivers, JT; Song, FH; Ichikawa, Y (2004)
    Bioorganic Chem. 32(4), 244-262.

  195. "Detailed kinetic studies of an aggregating inhibitor; Inhibition of phosphomannomutase/phosphoglucomutase by Disperse Blue 56"
    Liu, HY; Wang, ZH; Regni, C; Zou, XQ; Tipton, PA (2004)
    Biochemistry 43(27), 8662-8669.

  196. "Phosphorylation and binding interactions of CheY studied by use of badan-labeled protein"
    Stewart, RC; VanBruggen, R (2004)
    Biochemistry 43(27), 8766-8777.

  197. "Periodic cycles of RNA unwinding and pausing by hepatitis C virus NS3 helicase"
    Serebrov, V; Pyle, AM (2004)
    Nature 430(6998), 476-480.

  198. "The perfect penicillin? Inhibition of a bacterial DD-peptidase by peptidoglycan-mimetic beta-lactams"
    Josephine, HR; Kumar, I; Pratt, RF (2004)
    J. Am. Chem. Soc. 126(26), 8122-8123.

  199. "Biosynthesis of isoprenoids - A bifunctional IspDF enzyme from Campylobacter jejuni"
    Gabrielsen, M; Rohdich, F; Eisenreich, W; Grawert, T; Hecht, S; Bacher, A; Hunter, WN (2004)
    Eur. J. Biochem. 271(14), 3028-3035.

  200. "Biochemical characterization of Bacillus subtilis type II isopentenyl diphosphate isomerase, and phylogenetic distribution of isoprenoid biosynthesis pathways"
    Laupitz, R; Hecht, S; Amslinger, S; Zepeck, F; Kaiser, J; Richter, G; Schramek, N; Steinbacher, S; Huber, R; Arigoni, D; Bacher, A; Eisenreich, W; Rohdich, F (2004)
    Eur. J. Biochem. 271(13), 2658-2669.

  201. "Kinetic and structural characterization of a product complex of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase from Escherichia coli"
    Garcon, A; Bermingham, A; Lian, LY; Derrick, JP (2004)
    Biochem. J. 380(Pt. Part 3), 867-873.

  202. "Alanine racemase free energy profiles from global analyses of progress curves"
    Spies, MA; Woodward, JJ; Watnik, MR; Toney, MD (2004)
    J. Am. Chem. Soc. 126(24), 7464-7475.

  203. "Structural determinants of substrate binding to Bacillus cereus metallo-beta-lactamase"
    Rasia, RM; Vila, AJ (2004)
    J. Biol. Chem. 279(25), 26046-26051.

  204. "Hg2+-selective fluorogenic chemosensor derived from 8-aminoquinoline"
    Kim, YH; Youk, JS; Moon, SY; Choe, JI; Chang, SK (2004)
    Chem. Lett. 33(6), 702-703.

  205. "Toward better antibiotics: Crystallographic studies of a novel class of DD-peptidase/beta-lactamase inhibitors"
    Silvaggi, NR; Kaur, K; Adediran, SA; Pratt, RF; Kelly, JA (2004)
    Biochemistry 43(22), 7046-7053.

  206. "Protein displacement by an assembly of helicase molecules aligned along single-stranded DNA"
    Byrd, AK; Raney, KD (2004)
    Nat. Struct. Mol. Biol. 11(6), 531-538.

  207. "Catalysis of proline-directed protein phosphorylation by peptidyl-prolyl cis/trans isomerases"
    Weiwad, M; Werner, A; Rucknagel, P; Schierhorn, A; Kullertz, G; Fischer, G (2004)
    J. Mol. Biol. 339(3), 635-646.

  208. "Mixed nitrogen/oxygen ligand affinities for bipositive metal ions and dioxygen binding to cobalt(II) complexes"
    Del Piero, S; Melchior, A; Polese, P; Portanova, R; Tolazzi, M (2004)
    Dalton Trans. (9), 1358-1365.

  209. "Crystal structure to 1.7 angstrom of the Escherichia coli pyrimidine nucleoside hydrolase YeiK, a novel candidate for cancer gene therapy"
    Giabbai, B; Degano, M (2004)
    Structure 12(5), 739-749.

  210. "A1a226 to Gly and Ser 189 to Asp mutations convert rat chymotrypsin B to a trypsin-like protease"
    Jelinek, B; Antal, J; Venekei, I; Graf, L (2004)
    Protein Eng. Des. Sel. 17(2), 127-131.

  211. "Formation and reduction of aryl and heterocyclic nitroso compounds and significance in the flux of hydroxylamines"
    Kim, DH; Kadlubar, FF; Teitel, CH; Guengerich, FP (2004)
    Chem. Res. Toxicol. 17(4), 529-536.

  212. "Substitution of the conserved Arg-Tyr dyad selectively disrupts the hydrolysis phase of the IMP dehydrogenase reaction"
    Schlippe, YVG; Riera, TV; Seyedsayamdost, MR; Hedstrom, L (2004)
    Biochemistry 43(15), 4511-4521.

  213. "Formation of factors IXa and Xa by the extrinsic pathway - Differential regulation by tissue factor pathway inhibitor and antithrombin III"
    Lu, G; Broze, GJ; Krishnaswamy, S (2004)
    J. Biol. Chem. 279(17), 17241-17249.

  214. "alpha(2)-Macroglobulin is a novel substrate for ADAMTS-4 and ADAMTS-5 and represents an endogenous inhibitor of these enzymes"
    Tortorella, MD; Arner, EC; Hills, R; Easton, A; Korte-Sarfaty, J; Fok, K; Wittwer, AJ; Liu, RQ; Malfait, AM (2004)
    J. Biol. Chem. 279(17), 17554-17561.

  215. "The Mad2 spindle checkpoint protein has two distinct natively folded states"
    Luo, XL; Tang, ZY; Xia, GH; Wassmann, K; Matsumoto, T; Rizo, J; Yu, HT (2004)
    Nat. Struct. Mol. Biol. 11(4), 338-345.

  216. "Anti-cooperative oxidation of ubiquinol by the yeast cytochrome bc(1) complex"
    Covian, R; Gutierrez-Cirlos, EB; Trumpower, BL (2004)
    J. Biol. Chem. 279(15), 15040-15049.

  217. "Bromamine decomposition kinetics in aqueous solutions"
    Lei, HX; Marinas, BJ; Minear, RA (2004)
    Environ. Sci. Technol. 38(7), 2111-2119.

  218. "Mechanistic study of the hydrolysis of nitrocefin mediated by B.cereus metallo-beta-lactamase"
    Rasia, RM; Vila, AJ (2003)
    Arkivoc (Pt. Part 10), 507-516.

  219. "Pre-steady-state kinetics shows differences in processing of various DNA lesions by Escherichia coli formamidopyrimidine-DNA glycosylase"
    Koval, VV; Kuznetsov, NA; Zharkov, DO; Ishchenko, AA; Douglas, KT; Nevinsky, GA; Fedorova, OS (2004)
    Nucleic Acids Res. 32(3), 926-935.

  220. "Molecular characterization of Ancylostoma ceylanicum Kunitz-type serine protease inhibitor: Evidence for a role in hookworm-associated growth delay"
    Chu, D; Bungiro, RD; Ibanez, M; Harrison, LM; Campodonico, E; Jones, BF; Mieszczanek, J; Kuzmic, P; Cappello, M (2004)
    Infect. Immun. 72(4), 2214-2221.

  221. "Same fold with different mobility: Backbone dynamics of small protease inhibitors from the desert locust, Schistocerca gregaria"
    Szenthe, B; Gaspari, Z; Nagy, A; Perczel, A; Graf, L (2004)
    Biochemistry 43(12), 3376-3384.

  222. "Reductive elimination of aryl halides upon addition of hindered alkylphosphines to dimeric arylpalladium(II) halide complexes"
    Roy, AH; Hartwig, JF (2004)
    Organometallics 23(7), 1533-1541.

  223. "Kinetics of turnover of cefotaxime by the Enterobacter cloacae P99 and GCl beta-lactamases: Two free enzyme forms of the P99 beta-lactamase detected by a combination of pre- and post-steady state kinetics"
    Kumar, S; Adediran, SA; Nukaga, M; Pratt, RF (2004)
    Biochemistry 43(9), 2664-2672.

  224. "Chromoionophoric recognition of alkylamines by nitro derivative of calix[4]arene-crown-5 ether"
    Kim, JH; Hwang, AR; Choe, JI; Chang, SK (2004)
    Bull. Korean Chem. Soc. 25(2), 301-303.

  225. "Interaction between non-heme iron of lipoxygenases and cumene hydroperoxide: Basis for enzyme activation, inactivation, and inhibition"
    Vahedi-Faridi, A; Brault, PA; Shah, P; Kim, YW; Dunham, WR; Funk, MO (2004)
    J. Am. Chem. Soc. 126(7), 2006-2015.

  226. "Exceptionally fast self-cleavage by a Neurospora Varkud satellite ribozyme"
    Zamel, R; Poon, A; Jaikaran, D; Andersen, A; Olive, J; De Abreu, D; Collins, RA (2004)
    Proc. Natl. Acad. Sci. U. S. A. 101(6), 1467-1472.

  227. "A water-soluble m-phenylene ethynylene foldamer"
    Stone, MT; Moore, JS (2004)
    Org. Lett. 6(4), 469-472.

  228. "Essential roles of a dynamic loop in the catalysis of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase"
    Blaszczyk, J; Li, Y; Wu, Y; Shi, GB; Ji, XH; Yan, HG (2004)
    Biochemistry 43(6), 1469-1477.

  229. "Kinetics of multisubunit RNA polymerases: Experimental methods and data analysis"
    Holmes, SF; Foster, JE; Erie, DA (2003)
    Methods Enzymol. 371, 71-+.

  230. "Assay of transient state kinetics of RNA polymerase II elongation"
    Nedialkov, YA; Gong, XQ; Yamaguchi, Y; Handa, H; Burton, ZF (2003)
    Methods Enzymol. 371, 252-264.

  231. "Design, synthesis, and evaluation of 9-D-ribitylamino-1,3,7,9-tetrahydro-2,6,8-purinetriones bearing alkyl phosphate and alpha,alpha-difluorophosphonate substituents as inhibitors of riboflavin synthase and lumazine synthase"
    Cushman, M; Sambaiah, T; Jin, GY; Illarionov, B; Fischer, M; Bacher, A (2004)
    J. Org. Chem. 69(3), 601-612.

  232. "Fast folding of the HIV-1 and SIV gp41 six-helix bundles"
    Marti, DN; Bjelic, S; Lu, M; Bosshard, HR; Jelesarov, I (2004)
    J. Mol. Biol. 336(1), 1-8.

  233. "Association and dissociation kinetics for CheY interacting with the P2 domain of CheA"
    Stewart, RC; Van Bruggen, R (2004)
    J. Mol. Biol. 336(1), 287-301.

  234. "Mechanism of loading the Escherichia coli DNA polymerase III sliding clamp - I. Two distinct activities for individual ATP sites in the gamma complex"
    Williams, CR; Snyder, AK; Kuzmic, P; O'Donnell, M; Bloom, LB (2004)
    J. Biol. Chem. 279(6), 4376-4385.

  235. "Monomeric and dimeric bZIP transcription factor GCN4 bind at the same rate to their target DNA site"
    Cranz, S; Berger, C; Baici, A; Jelesarov, I; Bosshard, HR (2004)
    Biochemistry 43(3), 718-727.

  236. "Peptide ketobenzoxazole inhibitors bound to cathepsin K"
    McGrath, ME; Sprengeler, PA; Hill, CM; Martichonok, V; Cheung, H; Somoza, JR; Palmer, JT; Janc, JW (2003)
    Biochemistry 42(51), 15018-15028.

  237. "Oxygenation reaction of Co(trien)(2+) complex in dimethylsulfoxide and the aerobic oxidation of 2,6-di-tert-butylphenol catalyzed by Co(II)-amine complexes"
    Comuzzi, C; Melchior, A; Polese, P; Portanova, R; Tolazzi, M (2003)
    Inorg. Chim. Acta 355, 57-63.

  238. "Differential modes of recognition in N peptide-boxB complexes"
    Austin, RJ; Xia, TB; Ren, JS; Takahashi, TT; Roberts, RW (2003)
    Biochemistry 42(50), 14957-14967.

  239. "Uracil-directed ligand tethering: An efficient strategy for uracil DNA glycosylase (UNG) inhibitor development"
    Jiang, YL; Krosky, DJ; Seiple, L; Stivers, JT (2005)
    J. Am. Chem. Soc. 127(49), 17412-17420.

  240. "Inhibition of class D beta-lactamases by diaroyl phosphates"
    Majumdar, S; Adediran, SA; Nukaga, M; Pratt, RF (2005)
    Biochemistry 44(49), 16121-16129.

  241. "Transient state kinetic studies of the MutT-catalyzed nucleoside triphosphate pyrophosphohydrolase reaction"
    Xia, ZY; Azurmendi, HF; Mildvan, AS (2005)
    Biochemistry 44(46), 15334-15344.

  242. "Biosynthesis of isoprenoids. Purification and properties of IspG protein from Escherichia coli"
    Zepeck, F; Grawert, T; Kaiser, J; Schramek, N; Eisenreich, W; Bacher, A; Rohdich, F (2005)
    J. Org. Chem. 70(23), 9168-9174.

  243. "Membrane composition determines the fate of aggregated vesicles"
    Webb, SJ; Trembleau, L; Mart, RJ; Wang, X (2005)
    Org. Biomol. Chem. 3(20), 3615-3617.

  244. "Dehydration of D-fructose to hydroxymethylfurfural in sub- and supercritical fluids"
    Bicker, M; Kaiser, D; Ott, L; Vogel, H (2005)
    J. Supercrit. Fluids 36(2), 118-126.

  245. "Synthesis and properties of azobenzocrown ethers with pi-electron donor,or pi-electron donor and pi-electron acceptor group(s) on benzene ring(s)"
    Luboch, E; Wagner-Wysiecka, E; Poleska-Muchlado, Z; Kravtsov, VC (2005)
    Tetrahedron 61(45), 10738-10747.

  246. "Assembly of an RNA-protein complex - Binding of NusB and NusE (S10) proteins to boxA RNA nucleates the formation of the antitermination complex involved in controlling rRNA transcription in Escherichia coli"
    Greive, SJ; Lins, AF; von Hippel, PH (2005)
    J. Biol. Chem. 280(43), 36397-36408.

  247. "Cyclam based Hg(II)- and Cu(II)-selective fluoroionophore having appended pyrene function"
    Youn, NJ; Kim, JS; Song, KC; Kim, SH; Ahn, SD; Chang, SK (2005)
    Bull. Korean Chem. Soc. 26(5), 849-851.

  248. "Inhibition of class D beta-lactamases by acyl phosphates and phosphonates"
    Adediran, SA; Nukaga, M; Baurin, S; Frere, JM; Pratt, RF (2005)
    Antimicrob. Agents Chemother. 49(10), 4410-4412.

  249. "Design, synthesis, and biochemical evaluation of 1,5,6,7-tetrahydro-6,7-dioxo-9-D-ribitylaminolumazines bearing alkyl phosphate substituents as inhibitors of l